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WormBase Tree Display for Gene: WBGene00038604

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Name Class

WBGene00038604SMapS_parentSequencecb25.fpc4126
IdentityVersion2
NameCGC_nameCbr-unc-42From_analysisInferred_from_orthology
Sequence_nameCBG19368
Molecular_name (12)
Other_nameCBG_19368Accession_evidenceNDBHE601047
Public_nameCbr-unc-42
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
215 Oct 2007 15:19:45WBPerson2970Name_changeCGC_nameCbr-unc-42
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00026597
RNASeq_FPKMWBls:00000020.243104From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.70883From_analysisRNASeq.briggsae.WBls:0000002.control_mean
3.28995From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
4.59345From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.20943From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.76653From_analysisRNASeq.briggsae.WBls:0000002.control_median
2.08398From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000031.53465From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.33391From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.13317From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.04777From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.4755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000439.2705From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
42.1078From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
44.9452From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
34.1226From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
37.8435From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
38.1156From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
38.8595From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:000002414.158From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
14.3738From_analysisRNASeq.briggsae.WBls:0000024.control_mean
16.0912From_analysisRNASeq.briggsae.WBls:0000024.control_median
18.0244From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
18.652From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
6.66065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
7.27499From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
2.0191From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
WBls:00000270.241596From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.01613From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.80679From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
4.52419From_analysisRNASeq.briggsae.WBls:0000027.control_median
4.69786From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.74307From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000355.05459From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.314214From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.10979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
2.25535From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.40091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.77309From_analysisRNASeq.briggsae.WBls:0000038.control_mean
6.26746From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.041026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.06196From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.087104From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.112249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.319301From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.06197From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.428146From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.50453From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.744043From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
1.00593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.551659From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.554306From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.01029From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.20958From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.651323From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.780975From_analysisRNASeq.briggsae.WBls:0000063.control_median
1.13641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001011.53465From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.33618From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.82222From_analysisRNASeq.briggsae.total_over_all_stages.control_median
8.18803From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142114
Ortholog (32)
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans unc-42. In C. elegans, unc-42 is involved in several processes, including larval locomotory behavior; neuron differentiation; and positive regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19368a
CBG19368b
CBG19368c
CBG19368d
Corresponding_CDS_historyCBG19368:bp194
CBG19368:bp255
Corresponding_transcriptCBG19368a.1
CBG19368b.1
CBG19368c.1
CBG19368d.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1066958
Microarray_resultsGPL8303_CB6_WBGene00038604_A
GPL14143_CBG19368_300-359_0.914_12_A
GPL14143_CBG19368_591-650_0.823_33_C
GPL14143_CBG19368_728-787_0.937_4_B
MethodGene