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WormBase Tree Display for Gene: WBGene00095969

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Name Class

WBGene00095969SMapS_parentSequencePPA_ChrIV
IdentityVersion4
NameCGC_namePpa-gtl-1From_analysisInferred_from_orthology
Sequence_namePPA06415
Molecular_namePPA06415
PPA06415.1
PP62901
Other_nameGENEPREDICTION_SNAP300000062779
GENEPREDICTION_SNAP300000083125
UMM-S212-1.9Person_evidenceWBPerson606
Ppa-gon-2Inferred_automaticallyfrom gene merge
Public_namePpa-gtl-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
217 Nov 2017 15:19:42WBPerson4055Name_changeCGC_namePpa-gon-2
324 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00115831
420 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-gtl-1
Other_namePpa-gon-2
Acquires_mergeWBGene00115831
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgtl
RNASeq_FPKMWBls:00000322.18746From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.87725From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
2.18746From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
3.44428From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
OrthologWBGene00001651Caenorhabditis elegansFrom_analysisOMA
WBGene00001795Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WBGene00028384Caenorhabditis briggsaeFrom_analysisOMA
WBGene00033459Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WBGene00062550Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00142058Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00134037Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00291806Trichuris murisFrom_analysisWormBase-Compara
WBGene00298294Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00090814Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091780Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109333Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114349Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114368Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275327Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278184Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: TRPM, SLOG domain and SLOG in TRPM. Is an ortholog of C. elegans gtl-1. In C. elegans, gtl-1 is involved in defecation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA06415
Corresponding_transcriptPPA06415.1
Other_sequence (14)
Experimental_infoMicroarray_resultsGPL14372_Probes_38862
GPL14372_Probes_38863
GPL14372_Probes_38864
GPL14372_Probes_38865
GPL14372_Probes_38866
GPL14372_Probes_38867
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041606:PP_X.nematophila_regulated
MethodGene