WormBase Tree Display for Gene: WBGene00067090

WBGene00067090 SMap: S_parent: Sequence: Crem_Contig115
  Identity: Version: 6
    Name: CGC_name: Cre-lip-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE24700
      Molecular_name: CRE24700
        CRE24700.1
        RP08880
      Other_name: cr01.sctg89.wum.50
        Cre-lip-1 From_analysis: Inferred_from_orthology
      Public_name: Cre-lip-1.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:47 WBPerson2970 Name_change: CGC_name: Cre-lip-1
        3 03 Jul 2008 11:46:15 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE24700
                Other_name: cr01.sctg89.wum.50
        4 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-lip-1.1
                Other_name: Cre-lip-1
        5 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Cre-lip-1
                Other_name: Cre-lip-1.1
        6 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Cre-lip-1.1
                Other_name: Cre-lip-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lip
    RNASeq_FPKM: WBls:0000004 5.0742 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        5.99537 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        6.91653 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 1.49874 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        18.9531 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        8.7941 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        9.07456 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        9.35503 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        9.65024 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 5.17362 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        6.71386 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        7.02521 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        7.94275 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 37.724 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        42.0411 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        5.97325 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        67.5238 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        6.78149 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        7.9242 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        79.9916 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        84.0522 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 16.9182 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        7.93348 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00161988
      00161989
      00161990
      00161991
    Ortholog (29)
    Paralog: WBGene00057397 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00073420 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051618 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00053946 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00054992 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00055470 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065448 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065671 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00073358 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00079849 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Is an ortholog of C. elegans lip-1. In C. elegans, lip-1 is involved in several processes, including negative regulation of Ras protein signal transduction; positive regulation of vulval development; and vulval cell fate specification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE24700
    Corresponding_transcript: CRE24700.1
    Other_sequence (15)
  Method: Gene