WormBase Tree Display for Gene: WBGene00060431

WBGene00060431 SMap: S_parent: Sequence: Crem_Contig11
  Identity: Version: 3
    Name: CGC_name: Cre-unc-57 From_analysis: Inferred_from_orthology
      Sequence_name: CRE03667
      Molecular_name: CRE03667
        CRE03667.1
        RP02956
      Other_name: cr01.sctg18.wum.74
      Public_name: Cre-unc-57
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:40 WBPerson2970 Name_change: CGC_name: Cre-unc-57
        3 03 Jul 2008 11:45:32 WBPerson4055 Event: Imported: from NGASP
              Name_change (2)
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 81.1578 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        87.3717 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        93.5855 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 35.1046 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        41.6788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        43.4414 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        45.204 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        45.6099 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        7.92574 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 13.837 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        35.2186 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        43.0569 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        48.7619 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 42.2399 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        42.6849 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        43.7635 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        63.0041 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        64.9146 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        82.2446 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        86.2807 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        92.2738 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 45.6813 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        51.4736 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155852
    Ortholog (30)
    Paralog: WBGene00051918 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00055206 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072565 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072784 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072786 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075990 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00076857 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in cytoplasm. Is an ortholog of C. elegans unc-57. In C. elegans, unc-57 is involved in clathrin-dependent endocytosis and necroptotic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE03667
    Corresponding_transcript: CRE03667.1
    Other_sequence: CBC00895_1
      Dviv_isotig25376
      CR03029
      ASC01350_1
      HG03451
      Name_isotig05128
      BE202311.1
      HGC09032_1
      CV200640.1
      PVC01369_1
      JI478196.1
      GO252759.1
      HS00881
      ES568861.1
      HS01022
      HGC07685_1
      XIC01805_1
      SSC02734_1
      Dviv_isotig33658
      TM03699
      HG06814
      EX563675.1
      FC555729.1
      EY468194.1
      TSC10541_1
      AS02640
      HGC06931_1
      HSC01198_1
      Oden_isotig17854
      Hbac_isotig00816
      OVC06445_1
      ACC02360_1
      JI175156.1
      CSC02089_1
      MIC05467_1
      AS04662
      ES568850.1
      TMC02148_1
      MC02808
      HSC01342_1
      CRC00315_1
      CR03384
      HS01288
      MCC04218_1
      FD516700.1
      Acan_isotig08067
      FC555660.1
      Hbac_isotig00817
      HG01072
      Oden_isotig28039
      MCC02476_1
      XI01000
      MC00374
      CRC02982_1
      SS00808
      JI172746.1
      HSC00854_1
  Experimental_info: Expr_pattern: Expr1108835
    Microarray_results: GPL14146_CRE03667_1037-1096_0.954_2_B
      GPL14146_CRE03667_1140-1199_0.958_1_A
      GPL14146_CRE03667_784-843_0.898_28_C
  Method: Gene