WormBase Tree Display for Gene: WBGene00060431

WBGene00060431 SMap: S_parent: Sequence: Crem_Contig11
  Identity: Version: 3
    Name: CGC_name: Cre-unc-57 From_analysis: Inferred_from_orthology
      Sequence_name: CRE03667
      Molecular_name: CRE03667
        CRE03667.1
        RP02956
      Other_name: cr01.sctg18.wum.74
      Public_name: Cre-unc-57
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:40 WBPerson2970 Name_change: CGC_name: Cre-unc-57
        3 03 Jul 2008 11:45:32 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE03667
                Other_name: cr01.sctg18.wum.74
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 81.1578 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        87.3717 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        93.5855 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 112.389 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        129.528 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        131.895 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        151.114 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        34.0203 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        35.0746 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        41.6779 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        43.3165 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        49.1189 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        52.5754 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        52.7437 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        52.8607 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        55.5313 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        57.1306 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        59.4693 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        61.3823 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        61.775 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
        61.882 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        63.2878 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        63.884 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        64.4454 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        64.7683 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        65.2097 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        65.7101 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        65.7421 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        67.7062 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        69.2548 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        69.4638 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        69.7357 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        69.848 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        70.6789 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        71.8613 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        73.0981 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
        73.8088 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        75.0314 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        75.65 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        75.7778 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        76.7009 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        76.7165 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        78.5903 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        78.9976 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        79.0429 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        79.5202 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        79.6027 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        81.4041 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        83.9172 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        88.3241 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        89.5998 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        90.1782 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        90.1831 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        90.4617 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        91.5303 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        91.5324 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
      WBls:0000027 35.1046 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        41.6788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        43.4414 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        45.204 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        45.6099 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        7.92574 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 13.837 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        35.2186 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        43.0569 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        48.7619 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 42.2399 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        42.6849 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        43.7635 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        63.0041 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        64.9146 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        82.2446 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        86.2807 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        92.2738 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 42.4996 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        43.8714 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        45.0254 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        45.7527 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        46.9003 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        51.6799 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        52.8008 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        56.4595 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        60.181 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        61.5181 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        62.4291 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        63.3706 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
      WBls:0000101 45.6813 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        51.4736 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00155852
    Ortholog: WBGene00006791 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00040890 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00163512 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00117351 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00125860 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00225806 Brugia malayi From_analysis: WormBase-Compara
      WBGene00237374 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g9341 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7630 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2682 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14792 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6658 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g499 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2984 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g22075 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g17236 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21108 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00351.g9604 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g750 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8509 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00461.g11673 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14743 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001237 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05701 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06261 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08154 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16569 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10308110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g754 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00259642 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00051918 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00055206 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072565 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072784 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072786 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075990 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00076857 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in cytoplasm. Is an ortholog of C. elegans unc-57. In C. elegans, unc-57 is involved in clathrin-dependent endocytosis and necroptotic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE03667
    Corresponding_transcript: CRE03667.1
    Other_sequence: CBC00895_1
      Dviv_isotig25376
      CR03029
      ASC01350_1
      HG03451
      Name_isotig05128
      BE202311.1
      HGC09032_1
      CV200640.1
      PVC01369_1
      JI478196.1
      GO252759.1
      HS00881
      ES568861.1
      HS01022
      HGC07685_1
      XIC01805_1
      SSC02734_1
      Dviv_isotig33658
      TM03699
      HG06814
      EX563675.1
      FC555729.1
      EY468194.1
      TSC10541_1
      AS02640
      HGC06931_1
      HSC01198_1
      Oden_isotig17854
      Hbac_isotig00816
      OVC06445_1
      ACC02360_1
      JI175156.1
      CSC02089_1
      MIC05467_1
      AS04662
      ES568850.1
      TMC02148_1
      MC02808
      HSC01342_1
      CRC00315_1
      CR03384
      HS01288
      MCC04218_1
      FD516700.1
      Acan_isotig08067
      FC555660.1
      Hbac_isotig00817
      HG01072
      Oden_isotig28039
      MCC02476_1
      XI01000
      MC00374
      CRC02982_1
      SS00808
      JI172746.1
      HSC00854_1
  Experimental_info: Expr_pattern: Expr1108835
    Microarray_results: GPL14146_CRE03667_1037-1096_0.954_2_B
      GPL14146_CRE03667_1140-1199_0.958_1_A
      GPL14146_CRE03667_784-843_0.898_28_C
  Method: Gene