WormBase Tree Display for Gene: WBGene00055921

WBGene00055921 SMap: S_parent: Sequence: Crem_Contig102
  Identity: Version: 3
    Name: CGC_name: Cre-unc-101 From_analysis: Inferred_from_orthology
      Sequence_name: CRE14181
      Molecular_name: CRE14181
        CRE14181.1
        RP10682
      Other_name: cr01.sctg6.wum.2
      Public_name: Cre-unc-101
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-unc-101
        3 03 Jul 2008 11:44:59 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE14181
                Other_name: cr01.sctg6.wum.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 35.57 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        40.9814 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        46.3929 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 19.7041 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        23.1337 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        23.1828 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        23.2318 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        2.53103 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        29.92 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 12.0777 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        15.7877 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        16.8858 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3.55954 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 11.7849 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        12.7765 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        12.7932 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        25.3649 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        25.845 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        37.9366 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        39.8636 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        39.9153 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
      WBls:0000063 (12)
      WBls:0000101 13.7963 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        18.3182 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00151447
      00151448
      00151449
    Ortholog (30)
    Paralog: WBGene00070363 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00060042 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051839 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00060198 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin adaptor complex. Is an ortholog of C. elegans unc-101. In C. elegans, unc-101 is involved in several processes, including cilium assembly; nematode larval development; and protein localization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE14181
    Corresponding_transcript: CRE14181.1
    Other_sequence: Acan_isotig20407
      SRC00797_1
      Tcol_isotig18946
      GRC03111_1
      CSC01366_1
      JI171471.1
      MHC11610_1
      ES570435.1
      GO252533.1
      TMC02499_1
      FC544643.1
      TSC11683_1
      Acan_isotig18623
      SR02839
      PPC00058_1
      MH05137
      SRC03627_1
      Hbac_isotig03593
      GO252417.1
      MHC01550_1
      PP01132
      FC817733.1
      Acan_isotig08116
      Dviv_isotig24951
      FC810878.1
      GRC04560_1
      TM03180
      CJC17884_1
      FC812122.1
      SR01594
      PPC11362_1
      Tcol_isotig20760
      Oden_isotig19467
      MH05138
      BXC06317_1
      FG580940.1
      CJC01471_1
      Hbac_isotig03784
      FC540831.1
      GR18742
      FD517006.1
      GR13858
  Experimental_info: Expr_pattern: Expr1114388
    Microarray_results: GPL14146_CRE14181_224-283_0.844_58_C
      GPL14146_CRE14181_331-390_0.873_43_A
      GPL14146_CRE14181_73-132_0.758_107_B
  Method: Gene