WormBase Tree Display for Gene: WBGene00044271

WBGene00044271 SMap: S_parent: Sequence: H12D21
  Identity: Version: 2
    Name: CGC_name: nspa-2 Person_evidence: WBPerson1983
      Sequence_name: H12D21.12
      Molecular_name: H12D21.12
        H12D21.12.1
        CE15223
      Other_name: CELE_H12D21.12 Accession_evidence: NDB BX284605
      Public_name: nspa-2
    DB_info: Database: WormFlux gene WBGene00044271
        NDB locus_tag CELE_H12D21.12
        NCBI gene 3565045
        RefSeq protein NM_001028836.3
        TrEMBL UniProtAcc G5EDJ8
        UniProt_GCRP UniProtAcc G5EDJ8
    Species: Caenorhabditis elegans
    History: Version_change: 1 22 Mar 2005 15:20:40 WBPerson1983 Event: Created
        2 01 Apr 2005 11:59:21 WBPerson2970 Name_change: CGC_name: nspa-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspa
    Allele (21)
    RNASeq_FPKM (74)
    Ortholog: WBGene00027402 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00037775 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00158592 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00270986 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g5930 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      FL83_10514 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005198 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_005232 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00078007 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog: WBGene00010377 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012294 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013887 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013888 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044272 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in neurons based on microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including hydrogen sulfide; multi-walled carbon nanotube; and Tunicamycin based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H12D21.12
    Corresponding_transcript: H12D21.12.1
    Other_sequence: FD514598.1
      CSC02319_1
    Associated_feature: WBsf1002177
      WBsf1020943
  Experimental_info: RNAi_result: WBRNAi00058904 Inferred_automatically: RNAi_primary
      WBRNAi00042264 Inferred_automatically: RNAi_primary
      WBRNAi00021689 Inferred_automatically: RNAi_primary
      WBRNAi00054861 Inferred_automatically: RNAi_primary
      WBRNAi00016241 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1153102
    Drives_construct: WBCnstr00023667
    Construct_product: WBCnstr00023667
    Microarray_results: 172431_x_at
      GPL19516_CGZ0026165
      GPL21109_H12D21.12
      GPL8304_CE_WBGene00044271_A
      GPL8673_H12D21_12P00046
    Expression_cluster (73)
  Map_info: Map: V Position: 6.99935
    Positive: Positive_clone: H12D21 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene