WormBase Tree Display for Gene: WBGene00010377

WBGene00010377 SMap: S_parent: Sequence: H12D21
  Identity: Version: 2
    Name: CGC_name: nspa-1 Person_evidence: WBPerson1983
      Sequence_name: H12D21.1
      Molecular_name: H12D21.1
        H12D21.1.1
        CE15223
      Other_name: CELE_H12D21.1 Accession_evidence: NDB BX284605
      Public_name: nspa-1
    DB_info: Database: AceView gene 5P366
        WormQTL gene WBGene00010377
        WormFlux gene WBGene00010377
        NDB locus_tag CELE_H12D21.1
        NCBI gene 179985
        RefSeq protein NM_074268.5
        TrEMBL UniProtAcc G5EDJ8
        UniProt_GCRP UniProtAcc G5EDJ8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Apr 2005 11:59:21 WBPerson2970 Name_change: CGC_name: nspa-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nspa
    Allele (24)
    RNASeq_FPKM (74)
    Ortholog: WBGene00027402 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00037775 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00158592 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00270986 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CSP26.g5930 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      FL83_10514 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005198 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_005232 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00078007 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog: WBGene00012294 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013887 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013888 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044271 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044272 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is affected by several genes including daf-16; daf-2; and age-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including hydrogen sulfide; methylmercuric chloride; and D-glucose based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H12D21.1
    Corresponding_transcript: H12D21.1.1
    Other_sequence: CBC07607_1
    Associated_feature: WBsf1002174
      WBsf1020940
  Experimental_info: RNAi_result: WBRNAi00058904 Inferred_automatically: RNAi_primary
      WBRNAi00021689 Inferred_automatically: RNAi_primary
      WBRNAi00022677 Inferred_automatically: RNAi_primary
      WBRNAi00054861 Inferred_automatically: RNAi_primary
      WBRNAi00016241 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1153099
    Drives_construct: WBCnstr00031457
    Construct_product: WBCnstr00031457
    Microarray_results: SMD_H12D21.1
    Expression_cluster (69)
    Interaction (136)
  Map_info: Map: V Position: 6.99684
    Positive: Positive_clone: H12D21 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene