WormBase Tree Display for Gene: WBGene00044271
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WBGene00044271 | SMap | S_parent | Sequence | H12D21 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nspa | |||||
Allele (21) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog | WBGene00027402 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||
WBGene00037775 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||
WBGene00158592 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | |||
WBGene00270986 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||
CSP26.g5930 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | |||
FL83_10514 | Caenorhabditis latens | From_analysis | WormBase-Compara | |||
GCK72_005198 | Caenorhabditis remanei | From_analysis | WormBase-Compara | |||
GCK72_005232 | Caenorhabditis remanei | From_analysis | WormBase-Compara | |||
WBGene00078007 | Caenorhabditis remanei | From_analysis | WormBase-Compara | |||
Paralog | WBGene00010377 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||
WBGene00012294 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00013887 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00013888 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00044272 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in neurons based on microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on RNA-seq and microarray studies. Is affected by thirteen chemicals including hydrogen sulfide; multi-walled carbon nanotube; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | H12D21.12 | ||||
Corresponding_transcript | H12D21.12.1 | |||||
Other_sequence | FD514598.1 | |||||
CSC02319_1 | ||||||
Associated_feature | WBsf1002177 | |||||
WBsf1020943 | ||||||
Experimental_info | RNAi_result | WBRNAi00058904 | Inferred_automatically | RNAi_primary | ||
WBRNAi00042264 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00021689 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00054861 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00016241 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1153102 | |||||
Drives_construct | WBCnstr00023667 | |||||
Construct_product | WBCnstr00023667 | |||||
Microarray_results | 172431_x_at | |||||
GPL19516_CGZ0026165 | ||||||
GPL21109_H12D21.12 | ||||||
GPL8304_CE_WBGene00044271_A | ||||||
GPL8673_H12D21_12P00046 | ||||||
Expression_cluster (73) | ||||||
Map_info | Map | V | Position | 6.99935 | ||
Positive | Positive_clone | H12D21 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |