WormBase Tree Display for Gene: WBGene00022499

WBGene00022499 SMap: S_parent: Sequence: ZC8
  Identity: Version: 2
    Name: CGC_name: set-30 Person_evidence: WBPerson1730
            WBPerson268
            WBPerson632
      Sequence_name: ZC8.3
      Molecular_name: ZC8.3
        ZC8.3.1
        CE33744
      Other_name: tag-226 Person_evidence: WBPerson201
        CELE_ZC8.3 Accession_evidence: NDB BX284606
      Public_name: set-30
    DB_info: Database: AceView gene XF621
        WormQTL gene WBGene00022499
        WormFlux gene WBGene00022499
        NDB locus_tag CELE_ZC8.3
        Panther gene CAEEL|WormBase=WBGene00022499|UniProtKB=Q23084
          family PTHR12197
        NCBI gene 180772
        RefSeq protein NM_076449.6
        TREEFAM TREEFAM_ID TF106487
        TrEMBL UniProtAcc Q23084
        UniProt_GCRP UniProtAcc Q23084
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 03 May 2007 10:33:07 WBPerson2970 Name_change: CGC_name: set-30
                Other_name: tag-226
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: set
    Allele (65)
    Strain: WBStrain00036009
    RNASeq_FPKM (74)
    GO_annotation: 00077222
      00077223
      00077224
      00077225
    Ortholog (31)
    Paralog: WBGene00009370 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011068 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00044070 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007403 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: set-30 encodes a divergent ortholog of human SMYD1 (OMIM:606846), SMYD2 (OMIM:610663), and SYMD3 (OMIM:608783); SET-30 is paralogous to SET-10, SET-14, and SET-18; neither set-30(gk314) nor set-30(RNAi) have any obvious phenotypes. Paper_evidence: WBPaper00030864
          Curator_confirmed: WBPerson567
          Date_last_updated: 08 Oct 2007 00:00:00
      Automated_description: Enables histone H3K4 methyltransferase activity. Predicted to be involved in chromatin remodeling. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZC8.3
    Corresponding_CDS_history: ZC8.3:wp97
    Corresponding_transcript: ZC8.3.1
    Other_sequence: BMC06420_1
      CJC13357_1
      JI465669.1
      JI464167.1
    Associated_feature: WBsf648062
      WBsf1005149
      WBsf1005150
      WBsf1022897
      WBsf235649
      WBsf235650
  Experimental_info: RNAi_result: WBRNAi00059019 Inferred_automatically: RNAi_primary
      WBRNAi00091495 Inferred_automatically: RNAi_primary
      WBRNAi00021757 Inferred_automatically: RNAi_primary
      WBRNAi00038103 Inferred_automatically: RNAi_primary
      WBRNAi00113460 Inferred_automatically: RNAi_primary
      WBRNAi00059020 Inferred_automatically: RNAi_primary
      WBRNAi00021758 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14377
      Expr1023927
      Expr1039942
      Expr1162451
      Expr2015775
      Expr2034008
    Drives_construct: WBCnstr00024201
    Construct_product: WBCnstr00024201
    Microarray_results (22)
    Expression_cluster (188)
    Interaction: WBInteraction000521297
      WBInteraction000521430
      WBInteraction000521432
      WBInteraction000560966
  Map_info: Map: X Position: -6.19835 Error: 0.000307
    Positive: Positive_clone: ZC8 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4925
        5406
    Pseudo_map_position
  Reference (12)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene