WormBase Tree Display for Gene: WBGene00022496
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| WBGene00022496 | SMap | S_parent | Sequence | Y119D3B | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxa-92 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | Y119D3B.20 | |||||||||
| Molecular_name | Y119D3B.20 | |||||||||
| Other_name | CELE_Y119D3B.20 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | fbxa-92 | |||||||||
| DB_info | Database | AceView | gene | 3C348 | ||||||
| WormQTL | gene | WBGene00022496 | ||||||||
| WormFlux | gene | WBGene00022496 | ||||||||
| NDB | locus_tag | CELE_Y119D3B.20 | ||||||||
| NCBI | gene | 191047 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-92 | |||||
| 3 | 20 Jan 2020 12:23:10 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxa | |||||||||
| Allele | WBVar02122814 | |||||||||
| WBVar02124102 | ||||||||||
| WBVar02121160 | ||||||||||
| WBVar02121161 | ||||||||||
| WBVar01498421 | ||||||||||
| WBVar01500082 | ||||||||||
| WBVar02122455 | ||||||||||
| WBVar02123378 | ||||||||||
| WBVar01498803 | ||||||||||
| WBVar01499552 | ||||||||||
| WBVar02124687 | ||||||||||
| WBVar02121743 | ||||||||||
| WBVar02123218 | ||||||||||
| WBVar01498832 | ||||||||||
| WBVar02124886 | ||||||||||
| WBVar02123052 | ||||||||||
| WBVar02124344 | ||||||||||
| WBVar02121584 | ||||||||||
| WBVar02120666 | ||||||||||
| WBVar02121405 | ||||||||||
| WBVar02123987 | ||||||||||
| WBVar02124182 | ||||||||||
| WBVar01498691 | ||||||||||
| WBVar02123462 | ||||||||||
| WBVar02122560 | ||||||||||
| WBVar02122377 | ||||||||||
| WBVar02124402 | ||||||||||
| WBVar01498734 | ||||||||||
| WBVar01498558 | ||||||||||
| WBVar01498757 | ||||||||||
| WBVar02121866 | ||||||||||
| WBVar02123903 | ||||||||||
| WBVar01498589 | ||||||||||
| WBVar01499879 | ||||||||||
| WBVar01499880 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00080372 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| Paralog (216) | ||||||||||
| Structured_description | Concise_description | fbxa-92 encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; FBXA-92 also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | ||||||
| Curator_confirmed | WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Enriched in MSpaaaaa and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including D-glucopyranose; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y119D3B.20:wp275 | ||||||||
| Corresponding_pseudogene | Y119D3B.20 | |||||||||
| Associated_feature | WBsf991263 | |||||||||
| WBsf1014207 | ||||||||||
| Experimental_info | Expr_pattern | Expr1159019 | ||||||||
| Expr2011588 | ||||||||||
| Expr2029827 | ||||||||||
| Drives_construct | WBCnstr00024203 | |||||||||
| Construct_product | WBCnstr00024203 | |||||||||
| Microarray_results | 176135_s_at | |||||||||
| A_12_P101767 | ||||||||||
| GPL3518_CE26483 | ||||||||||
| Expression_cluster (74) | ||||||||||
| Interaction | WBInteraction000504154 | |||||||||
| Map_info | Map | III | Position | -22.5743 | ||||||
| Positive | Positive_clone | Y119D3B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
