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WormBase Tree Display for Gene: WBGene00022159

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Name Class

WBGene00022159SMapS_parentSequenceY71G12B
IdentityVersion2
NameCGC_namemppa-1Paper_evidenceWBPaper00027699
Sequence_nameY71G12B.24
Molecular_nameY71G12B.24a
Y71G12B.24a.1
CE48095
Y71G12B.24b
CE49612
Y71G12B.24b.1
Other_nameCELE_Y71G12B.24Accession_evidenceNDBBX284601
Public_namemppa-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:05WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Jul 2006 09:57:21WBPerson2970Name_changeCGC_namemppa-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmppa
AlleleWBVar01711997
WBVar01418454
WBVar01418455
WBVar01711998
WBVar01711999
WBVar01474861
WBVar01418457
WBVar01474862
WBVar01712000
WBVar00016621
WBVar01418458
WBVar01474863
WBVar01712001
WBVar01712002
WBVar01474864
WBVar01418460
WBVar01474865
WBVar01316606
WBVar01418464
WBVar01681356
WBVar00326914
WBVar00326915
WBVar01418466
WBVar00016626
WBVar00326916
WBVar01418468
WBVar00326917
WBVar00016631
WBVar01418469
WBVar00326918
WBVar01418472
WBVar00533939
WBVar00326919
WBVar01943031
WBVar00533940
WBVar00326920
WBVar01418473
WBVar00533943
WBVar00326921
WBVar00016636
WBVar01418474
WBVar00533944
WBVar00326922
WBVar01418475
WBVar02015953
WBVar01339398
WBVar01418476
WBVar00326923
WBVar00533947
WBVar02015954
WBVar01418477
WBVar00016641
WBVar02015955
WBVar00533949
WBVar00326924
WBVar00326925
WBVar00533950
WBVar02015956
WBVar00326926
WBVar02015957
WBVar01418480
WBVar00533953
WBVar02015958
WBVar00326927
WBVar00533957
WBVar01418481
WBVar00016646
WBVar00533958
WBVar02015959
WBVar01418482
WBVar00326928
WBVar01418487
WBVar02015960
WBVar00326929
WBVar02015961
WBVar01956053
WBVar00016651
WBVar00326930
WBVar00326931
WBVar02015962
WBVar00310532
WBVar01956055
WBVar02015963
WBVar00326932
WBVar01418491
WBVar01788376
WBVar01956056
WBVar00310533
WBVar01889564
WBVar01889565
WBVar00016656
WBVar01418492
WBVar00326933
WBVar02015964
WBVar01956057
WBVar01573644
WBVar00310534
WBVar01956059
WBVar00326934
WBVar02015965
WBVar01889566
WBVar01573645
WBVar02015966
WBVar01956060
WBVar01573646
WBVar01889567
WBVar01889568
WBVar01573647
WBVar01889569
WBVar01573648
WBVar01889570
WBVar01573649
WBVar02079398
WBVar01889571
WBVar01573650
WBVar01408911
WBVar01889572
WBVar01889573
WBVar01889574
WBVar01947583
WBVar01947585
WBVar01400044
WBVar01947587
WBVar02049325
WBVar02078662
WBVar01947588
WBVar01408922
WBVar01499559
WBVar02028214
WBVar02028215
WBVar02028216
WBVar01399044
WBVar02028217
WBVar02028218
WBVar02028219
WBVar02028220
WBVar02028221
WBVar02028222
WBVar02028223
WBVar02028224
WBVar01408945
WBVar02118819
WBVar01316683
WBVar01693780
WBVar01399711
WBVar01693781
WBVar01277964
WBVar01693782
WBVar01277965
WBVar02070480
WBVar01399489
WBVar02006230
WBVar02009554
WBVar01277966
WBVar02006231
WBVar01277967
WBVar02009555
WBVar02009556
WBVar01277968
WBVar01277969
WBVar02009557
WBVar01640492
WBVar01277970
WBVar02009558
WBVar01622570
WBVar02009559
WBVar01277974
WBVar01408967
WBVar02009560
WBVar01277976
WBVar01277980
WBVar01277981
WBVar01277983
WBVar00278061
WBVar01277985
WBVar01408978
WBVar01277987
WBVar01411051
WBVar01277988
WBVar01411052
WBVar01545806
WBVar01411053
WBVar01277989
WBVar01277990
WBVar01691588
WBVar01545807
WBVar01411054
WBVar01782686
WBVar02087008
WBVar01691589
WBVar01411057
WBVar01545808
WBVar01277991
WBVar01499786
WBVar01430334
WBVar01691590
WBVar01277992
WBVar01430335
WBVar01277993
WBVar01691591
WBVar02083699
WBVar01801181
WBVar02126389
WBVar01277994
WBVar01691592
WBVar02126390
WBVar01408989
WBVar01691593
WBVar02145288
WBVar01277996
WBVar02126391
WBVar02126392
WBVar01277998
WBVar01277999
WBVar02126393
WBVar01278002
WBVar02126394
WBVar02032944
WBVar01399155
WBVar01278003
WBVar02126395
WBVar02032945
WBVar01278004
WBVar02126396
WBVar01278005
WBVar02126397
WBVar01409000
WBVar01400155
WBVar01278007
WBVar02112232
WBVar01398661
WBVar01530826
WBVar01278008
WBVar01398662
WBVar01530827
WBVar01398663
WBVar00096322
WBVar01398664
WBVar01530828
WBVar01530829
WBVar01499619
WBVar01530830
WBVar01530831
WBVar01530832
WBVar01530833
WBVar01530834
WBVar02066236
WBVar01530835
WBVar02066237
WBVar01530836
WBVar02066238
WBVar02099913
WBVar02066239
WBVar02001332
WBVar02066240
WBVar02001333
WBVar02001334
WBVar01409022
WBVar01761856
WBVar02075011
WBVar01399822
WBVar01761857
WBVar01931057
WBVar01761858
WBVar01704546
WBVar01761859
WBVar02122192
WBVar01931059
WBVar01898043
WBVar01761860
WBVar01931060
WBVar01898044
WBVar01761861
WBVar01931061
WBVar01931064
WBVar01761862
WBVar01761863
WBVar01931065
WBVar00615579
WBVar01931066
WBVar00615580
WBVar01409033
WBVar00615581
WBVar01931067
WBVar00615582
WBVar01931068
WBVar02122751
WBVar01398933
WBVar00615583
WBVar01931069
WBVar01931070
WBVar00615584
WBVar01555837
WBVar00615585
WBVar01555838
WBVar01555839
WBVar00615586
WBVar01555840
WBVar00615587
WBVar01399266
WBVar01908020
WBVar00615588
WBVar01555841
WBVar00615589
WBVar02039252
WBVar01555842
WBVar01908021
WBVar01555843
WBVar00615590
WBVar02039253
WBVar02097178
WBVar00615591
WBVar02039254
WBVar01555844
WBVar01661765
WBVar01555845
WBVar02039255
WBVar00615592
WBVar02102517
WBVar01661766
WBVar00615593
WBVar02076896
WBVar00615594
WBVar01661767
WBVar00149370
WBVar01661768
WBVar00615595
WBVar00615596
WBVar00149371
WBVar01661769
WBVar00615597
WBVar00149372
WBVar01661770
WBVar00615598
WBVar01661771
WBVar00149373
WBVar00615599
WBVar00149374
WBVar01661772
WBVar00615600
WBVar00149375
WBVar00149376
WBVar00615601
WBVar00615602
WBVar00149377
WBVar01402617
WBVar00615603
WBVar00149378
WBVar00615604
WBVar00149379
WBVar01402618
WBVar00615605
WBVar00149380
WBVar01402619
WBVar01402620
WBVar00615606
WBVar00149381
WBVar00149382
WBVar00615607
WBVar02011746
WBVar00615608
WBVar00149383
WBVar01402623
WBVar00149385
WBVar01402624
WBVar00615609
WBVar01402625
WBVar00615610
WBVar00149386
WBVar02014025
WBVar01402626
WBVar00615611
WBVar00149387
WBVar00149388
WBVar00615612
WBVar02108426
WBVar00149389
WBVar00615613
WBVar01825386
WBVar01316517
WBVar00149390
WBVar01399600
WBVar00615614
WBVar01825387
WBVar00149391
WBVar00615615
WBVar02011290
WBVar00615616
WBVar00149392
WBVar01655121
WBVar00615617
WBVar00149393
WBVar00615618
WBVar00149394
WBVar00615619
WBVar00149395
WBVar00149396
WBVar00615620
WBVar00149397
WBVar00615621
WBVar00615622
WBVar02106043
WBVar00615623
WBVar00615624
WBVar01399933
WBVar00615625
WBVar00615626
WBVar02095375
WBVar01316561
WBVar00615627
WBVar01391347
WBVar01391348
WBVar00615628
WBVar01391349
WBVar00615629
WBVar01391350
WBVar01711989
WBVar00615630
WBVar01391351
WBVar01711990
WBVar00615631
WBVar00615632
WBVar01711991
WBVar01391352
WBVar01826326
WBVar01694446
WBVar00615633
WBVar01711992
WBVar01316572
WBVar00615634
WBVar01694447
WBVar01711993
WBVar01711994
WBVar01418449
WBVar00615635
WBVar01694448
WBVar02071521
WBVar01711995
WBVar01418452
WBVar01399377
WBVar00615636
WBVar01711996
WBVar01418453
RNASeq_FPKM (74)
GO_annotation00089114
00089115
00089116
00089117
00089118
00089119
00089120
00089121
00126335
Ortholog (40)
ParalogWBGene00013880Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018963Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011679Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012158Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013492Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015360Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015481Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018426Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020757Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionContributes to metalloendopeptidase activity. Involved in proteolysis. Part of mitochondrial processing peptidase complex. Human ortholog(s) of this gene implicated in autosomal recessive spinocerebellar ataxia 2. Is an ortholog of human PMPCA (peptidase, mitochondrial processing subunit alpha).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0080061Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:18667)
Molecular_infoCorresponding_CDSY71G12B.24a
Y71G12B.24b
Corresponding_CDS_historyY71G12B.24:wp236
Corresponding_transcriptY71G12B.24a.1
Y71G12B.24b.1
Other_sequence (52)
Associated_featureWBsf218988
Experimental_infoRNAi_resultWBRNAi00117122Inferred_automaticallyRNAi_primary
WBRNAi00102819Inferred_automaticallyRNAi_primary
WBRNAi00058211Inferred_automaticallyRNAi_primary
Expr_patternExpr1028092
Expr1039763
Expr1161627
Expr2013669
Expr2031903
AntibodyWBAntibody00001110
Microarray_results (16)
Expression_cluster (124)
Interaction (42)
Map_infoMapIPosition-13.0232Error0.046413
PositivePositive_cloneY71G12BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027699
WBPaper00030701
WBPaper00038491
WBPaper00048759
WBPaper00055090
WBPaper00064339
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene