WormBase Tree Display for Gene: WBGene00021948

WBGene00021948 SMap: S_parent: Sequence: Y55F3C
  Identity: Version: 3
    Name: CGC_name: kvs-5 Person_evidence: WBPerson260
            WBPerson145
      Sequence_name: Y55F3C.3
      Molecular_name (18)
      Other_name: Y55F3C.f Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        Y55F3C.e Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y55F3C.3 Accession_evidence: NDB BX284604
      Public_name: kvs-5
    DB_info: Database: AceView gene 4B505
        WormQTL gene WBGene00021948
        WormFlux gene WBGene00021948
        NDB locus_tag CELE_Y55F3C.3
        Panther gene CAEEL|WormBase=WBGene00021948|UniProtKB=U4PLR3
          family PTHR11537
        NCBI gene 176899
        RefSeq protein NM_067577.8
            NM_001307395.4
            NM_001307396.4
            NM_001307394.3
            NM_001307393.3
            NM_001307392.3
        TrEMBL UniProtAcc U4PE60
            U4PR20
            U4PBB7
            U4PAX5
            Q95XV8
            U4PLR3
        UniProt_GCRP UniProtAcc U4PLR3
        OMIM gene 600397
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Jul 2011 16:30:08 WBPerson2970 Name_change: CGC_name: kvs-5
        3 04 Sep 2013 14:28:38 WBPerson4025 Event: Acquires_merge: WBGene00043706
      Acquires_merge: WBGene00043706
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: kvs
    Allele: WBVar01818411
      WBVar00882519
      WBVar00882520
      WBVar01818412
      WBVar00882521
      WBVar01818413
      WBVar00882522
      WBVar01818414
      WBVar00882523
      WBVar01818415
      WBVar01818416
      WBVar00882524
      WBVar01771564
      WBVar00882525
      WBVar01818417
      WBVar01771565
      WBVar01818418
      WBVar00882526
      WBVar00415972
      WBVar00882527
      WBVar01984563
      WBVar01818419
      WBVar01984564
      WBVar01818420
      WBVar00415973
      WBVar00882528
      WBVar00882529
      WBVar01984565
      WBVar00415974
      WBVar01818421
      WBVar00882530
      WBVar01984566
      WBVar00415975
      WBVar01818422
      WBVar01984567
      WBVar00882531
      WBVar00415976
      WBVar00415977
      WBVar01984568
      WBVar00882532
      WBVar01629760
      WBVar00882533
      WBVar00415978
      WBVar01984569
      WBVar01984570
      WBVar00882534
      WBVar00415979
      WBVar00882535
      WBVar01984571
      WBVar01657226
      WBVar00415980
      WBVar01984572
      WBVar00415981
      WBVar00882536
      WBVar00064521
      WBVar00415982
      WBVar01499166
      WBVar00882537
      WBVar01984573
      WBVar02030841
      WBVar01492909
      WBVar00882538
      WBVar00415983
      WBVar01984574
      WBVar00415984
      WBVar00882539
      WBVar01984575
      WBVar00882540
      WBVar00415985
      WBVar00415986
      WBVar02111603
      WBVar00415987
      WBVar01608350
      WBVar00415988
      WBVar01608351
      WBVar01608352
      WBVar00415989
      WBVar01608353
      WBVar00415990
      WBVar01608354
      WBVar00415991
      WBVar01608355
      WBVar00415992
      WBVar00415993
      WBVar01608356
      WBVar01608357
      WBVar00415994
      WBVar01608358
      WBVar00415995
      WBVar01608359
      WBVar00415996
      WBVar00415997
      WBVar01608360
      WBVar00415998
      WBVar01608361
      WBVar00415999
      WBVar01608362
      WBVar01608363
      WBVar00416000
      WBVar01608364
      WBVar00416001
      WBVar00416002
      WBVar01608365
      WBVar00416003
      WBVar01608366
      WBVar00416004
      WBVar01608367
      WBVar00416005
      WBVar01608368
      WBVar01608369
      WBVar00416006
      WBVar01608370
      WBVar00416007
      WBVar00416008
      WBVar01608371
      WBVar00416009
      WBVar01608372
      WBVar01608373
      WBVar00416010
      WBVar02076802
      WBVar01608374
      WBVar00416011
      WBVar01608375
      WBVar00416012
      WBVar00416013
      WBVar01608376
      WBVar00416014
      WBVar01608377
      WBVar00416015
      WBVar01608378
      WBVar02067677
      WBVar01608379
      WBVar01608380
      WBVar01608381
      WBVar02095992
      WBVar01608382
      WBVar01608383
      WBVar01608384
      WBVar01608385
      WBVar01608386
      WBVar01608387
      WBVar01608388
      WBVar01608389
      WBVar01608390
      WBVar01493507
      WBVar01608391
      WBVar01608392
      WBVar01608393
      WBVar01608394
      WBVar01608395
      WBVar01608396
      WBVar01499954
      WBVar01608397
      WBVar01608398
      WBVar01499955
      WBVar01608399
      WBVar00882413
      WBVar00882414
      WBVar00882415
      WBVar00882416
      WBVar00882417
      WBVar00882418
      WBVar02133232
      WBVar00882419
      WBVar02133233
      WBVar00882420
      WBVar00882421
      WBVar00882422
      WBVar00882423
      WBVar00882424
      WBVar00882425
      WBVar00882426
      WBVar00882427
      WBVar00882428
      WBVar00882429
      WBVar00882430
      WBVar00882431
      WBVar00882432
      WBVar00882433
      WBVar00882434
      WBVar00882435
      WBVar00882436
      WBVar00882437
      WBVar00882438
      WBVar00882439
      WBVar00882441
      WBVar00253497
      WBVar00882442
      WBVar00882443
      WBVar00882444
      WBVar00882445
      WBVar00882446
      WBVar00263809
      WBVar00882447
      WBVar00882448
      WBVar00882449
      WBVar00882450
      WBVar00882451
      WBVar01499633
      WBVar00882452
      WBVar00882453
      WBVar00882454
      WBVar00882455
      WBVar01996241
      WBVar01996242
      WBVar00882456
      WBVar01996243
      WBVar00882457
      WBVar00882458
      WBVar01996244
      WBVar01996245
      WBVar00882459
      WBVar00882460
      WBVar01996246
      WBVar00882461
      WBVar01996247
      WBVar01996248
      WBVar00882462
      WBVar01996249
      WBVar00882463
      WBVar00882464
      WBVar01996250
      WBVar00882465
      WBVar00882466
      WBVar00882467
      WBVar02045884
      WBVar00882468
      WBVar02045885
      WBVar00882469
      WBVar02046818
      WBVar02045886
      WBVar02045887
      WBVar00882470
      WBVar02045888
      WBVar00882471
      WBVar02045889
      WBVar00882472
      WBVar02111350
      WBVar02045890
      WBVar02111351
      WBVar00882473
      WBVar02045891
      WBVar02111352
      WBVar00882474
      WBVar00882475
      WBVar02111353
      WBVar02045892
      WBVar02045893
      WBVar00882476
      WBVar02111354
      WBVar02045894
      WBVar00882477
      WBVar02053721
      WBVar00882478
      WBVar01647188
      WBVar01647189
      WBVar00882479
      WBVar00882480
      WBVar01647190
      WBVar01474052
      WBVar01647191
      WBVar00882481
      WBVar01450214
      WBVar00882482
      WBVar01647192
      WBVar01450215
      WBVar01647193
      WBVar00882483
      WBVar00882484
      WBVar01450216
      WBVar01647194
      WBVar01647195
      WBVar01450217
      WBVar00882485
      WBVar01450218
      WBVar00882486
      WBVar01647196
      WBVar01450219
      WBVar01647197
      WBVar00882487
      WBVar01450220
      WBVar02057439
      WBVar00882488
      WBVar01647198
      WBVar01450221
      WBVar00882489
      WBVar01647199
      WBVar01450222
      WBVar00882490
      WBVar01647200
      WBVar00568080
      WBVar01647201
      WBVar00882491
      WBVar01450223
      WBVar01647202
      WBVar00882492
      WBVar01450224
      WBVar01647203
      WBVar00882493
      WBVar01450225
      WBVar00882494
      WBVar01647204
      WBVar01450226
      WBVar01450227
      WBVar01647205
      WBVar00882495
      WBVar01647206
      WBVar01818388
      WBVar00882496
      WBVar00882497
      WBVar01647207
      WBVar01818389
      WBVar02092604
      WBVar00882498
      WBVar01818390
      WBVar01647208
      WBVar02092605
      WBVar01818391
      WBVar00882499
      WBVar01647209
      WBVar01818392
      WBVar00882500
      WBVar01647210
      WBVar00882501
      WBVar01818393
      WBVar00065365
      WBVar01499498
      WBVar01647211
      WBVar00882502
      WBVar01818394
      WBVar01647212
      WBVar01499499
      WBVar00882503
      WBVar01647213
      WBVar01818395
      WBVar00882504
      WBVar01647214
      WBVar01818396
      WBVar00882505
      WBVar01818397
      WBVar01647215
      WBVar00882506
      WBVar01647216
      WBVar01818398
      WBVar01818399
      WBVar01647217
      WBVar00882507
      WBVar01818400
      WBVar01647218
      WBVar00882508
      WBVar00882509
      WBVar01647219
      WBVar01818401
      WBVar00882510
      WBVar01818402
      WBVar01818403
      WBVar00882511
      WBVar00882512
      WBVar01818404
      WBVar00882513
      WBVar01818405
      WBVar01481109
      WBVar00882514
      WBVar01818406
      WBVar00882515
      WBVar01818407
      WBVar01818408
      WBVar00882516
      WBVar01818409
      WBVar00882517
      WBVar00882518
      WBVar01818410
    Strain: WBStrain00007651
    RNASeq_FPKM (74)
    GO_annotation (22)
    Ortholog (51)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Located in plasma membrane. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 26. Is an ortholog of human KCNF1 (potassium voltage-gated channel modifier subfamily F member 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080461 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6231)
      DOID:1826 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6231)
  Molecular_info: Corresponding_CDS: Y55F3C.3a
      Y55F3C.3c
      Y55F3C.3d
      Y55F3C.3e
      Y55F3C.3f
      Y55F3C.3g
    Corresponding_CDS_history: Y55F3C.3:wp175
      Y55F3C.3b:wp274
    Corresponding_transcript: Y55F3C.3a.1
      Y55F3C.3c.1
      Y55F3C.3d.1
      Y55F3C.3e.1
      Y55F3C.3f.1
      Y55F3C.3g.1
    Other_sequence (19)
    Associated_feature (27)
  Experimental_info: RNAi_result: WBRNAi00021056 Inferred_automatically: RNAi_primary
      WBRNAi00002374 Inferred_automatically: RNAi_primary
      WBRNAi00057555 Inferred_automatically: RNAi_primary
      WBRNAi00021057 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9462
      Expr1016026
      Expr1017500
      Expr1039655
      Expr1160988
      Expr1160989
      Expr2012988
      Expr2031220
    Drives_construct: WBCnstr00024396
    Construct_product: WBCnstr00014027
      WBCnstr00024396
    Microarray_results (44)
    Expression_cluster (195)
    Interaction: WBInteraction000112836
      WBInteraction000112839
      WBInteraction000112840
      WBInteraction000162561
      WBInteraction000167519
      WBInteraction000170122
      WBInteraction000293558
      WBInteraction000469834
      WBInteraction000472696
  Map_info: Map: IV Position: -23.571 Error: 0.008513
    Positive: Positive_clone: Y55F3C Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038444
    WBPaper00038491
    WBPaper00055090
    WBPaper00064898
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene