WormBase Tree Display for Variation: WBVar01647219
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WBVar01647219 | Name | Public_name | WBVar01647219 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00333883 | |||||||
Y55F3C.3c.1:c.1599-138T>C | ||||||||
Y55F3C.3e.1:c.1386-138T>C | ||||||||
Y55F3C.3d.1:c.1410-138T>C | ||||||||
Y55F3C.3a.1:c.1362-138T>C | ||||||||
Y55F3C.3g.1:c.1332-138T>C | ||||||||
Y55F3C.3f.1:c.1356-138T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.752541T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55F3C | ||||
Flanking_sequences | ACGAAAAAAAATGTATTTAAAAAATAATGA | TTTTTGATTTTAGGGGAAATCGATAAAATT | ||||||
Mapping_target | Y55F3C | |||||||
Source_location | 225 | CHROMOSOME_IV | 752541 | 752541 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021948 | ||||||
Transcript | Y55F3C.3e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55F3C.3e.1:c.1386-138T>C | |||||||
Intron_number | 11/12 | |||||||
Y55F3C.3g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55F3C.3g.1:c.1332-138T>C | |||||||
Intron_number | 10/12 | |||||||
Y55F3C.3f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55F3C.3f.1:c.1356-138T>C | |||||||
Intron_number | 11/13 | |||||||
Y55F3C.3d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55F3C.3d.1:c.1410-138T>C | |||||||
Intron_number | 12/13 | |||||||
Y55F3C.3c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55F3C.3c.1:c.1599-138T>C | |||||||
Intron_number | 13/14 | |||||||
Y55F3C.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55F3C.3a.1:c.1362-138T>C | |||||||
Intron_number | 11/13 | |||||||
Method | WGS_Flibotte |