WormBase Tree Display for Gene: WBGene00021885
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| WBGene00021885 | SMap | S_parent | Sequence | Y54G2A | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | Y54G2A.20 | ||||||||
| Molecular_name | Y54G2A.20 | |||||||||
| Other_name | CELE_Y54G2A.20 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y54G2A.20 | |||||||||
| DB_info | Database | AceView | gene | 4D660 | ||||||
| WormQTL | gene | WBGene00021885 | ||||||||
| WormFlux | gene | WBGene00021885 | ||||||||
| NDB | locus_tag | CELE_Y54G2A.20 | ||||||||
| NCBI | gene | 190281 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Sep 2013 15:55:35 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (60) | ||||||||||
| Strain | WBStrain00037013 | |||||||||
| WBStrain00037099 | ||||||||||
| WBStrain00037209 | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00069405 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | ||||||||||
| WBGene00162719 | Caenorhabditis brenneri | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00127143 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00083034 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog | WBGene00013537 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018671 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00019159 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00020942 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Enriched in NSM based on tiling array studies. Is affected by several genes including skn-1; pgl-1; and sod-2 based on RNA-seq studies. Is affected by four chemicals including metformin; Sirolimus; and bortezomib based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y54G2A.20:wp239 | ||||||||
| Corresponding_pseudogene | Y54G2A.20 | |||||||||
| Associated_feature | WBsf667786 | |||||||||
| WBsf667787 | ||||||||||
| WBsf667788 | ||||||||||
| WBsf667789 | ||||||||||
| WBsf667790 | ||||||||||
| WBsf667791 | ||||||||||
| WBsf229847 | ||||||||||
| WBsf229848 | ||||||||||
| Experimental_info | Expr_pattern | Expr1010238 | ||||||||
| Expr1160884 | ||||||||||
| Microarray_results (11) | ||||||||||
| Expression_cluster (41) | ||||||||||
| Map_info | Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | IV | -6.7213 | ||||||||
| Method | Gene |
