WormBase Tree Display for Gene: WBGene00019159
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| WBGene00019159 | SMap | S_parent | Sequence | H05C05 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | H05C05.3 | ||||||||
| Molecular_name | H05C05.3 | |||||||||
| Other_name | CELE_H05C05.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | H05C05.3 | |||||||||
| DB_info | Database | AceView | gene | 3E56 | ||||||
| WormQTL | gene | WBGene00019159 | ||||||||
| WormFlux | gene | WBGene00019159 | ||||||||
| NDB | locus_tag | CELE_H05C05.3 | ||||||||
| NCBI | gene | 186695 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 20 Jan 2020 12:18:24 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (44) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00069405 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00162719 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00127143 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| WBGene00083034 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog (12) | ||||||||||
| Structured_description | Automated_description | Enriched in intestine based on microarray studies. Is affected by several genes including clk-1; pgl-1; and lin-35 based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | H05C05.3:wp275 | ||||||||
| Corresponding_pseudogene | H05C05.3 | |||||||||
| Associated_feature | WBsf991639 | |||||||||
| WBsf1014493 | ||||||||||
| Experimental_info | Expr_pattern | Expr1011807 | ||||||||
| Expr1153045 | ||||||||||
| Expr2022748 | ||||||||||
| Microarray_results (19) | ||||||||||
| Expression_cluster (35) | ||||||||||
| Interaction | WBInteraction000218606 | |||||||||
| WBInteraction000247254 | ||||||||||
| WBInteraction000255653 | ||||||||||
| WBInteraction000303071 | ||||||||||
| WBInteraction000353478 | ||||||||||
| WBInteraction000412932 | ||||||||||
| WBInteraction000420743 | ||||||||||
| Map_info | Positive | Positive_clone | H05C05 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | III | -8.30164 | ||||||||
| Method | Gene |
