WormBase Tree Display for Gene: WBGene00021835
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| WBGene00021835 | SMap | S_parent | Sequence | Y54E10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y54E10A.17 | |||||||
| Molecular_name | Y54E10A.17a | ||||||||
| Y54E10A.17a.1 | |||||||||
| CE30044 | |||||||||
| Y54E10A.17b | |||||||||
| CE52119 | |||||||||
| Y54E10A.17b.1 | |||||||||
| Other_name | CELE_Y54E10A.17 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y54E10A.17 | ||||||||
| DB_info | Database | AceView | gene | 1D777 | |||||
| WormQTL | gene | WBGene00021835 | |||||||
| WormFlux | gene | WBGene00021835 | |||||||
| NDB | locus_tag | CELE_Y54E10A.17 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021835|UniProtKB=A0A2C9C360 | |||||||
| family | PTHR36516 | ||||||||
| NCBI | gene | 190261 | |||||||
| RefSeq | protein | NM_001356802.4 | |||||||
| NM_058721.7 | |||||||||
| TrEMBL | UniProtAcc | Q8WTL3 | |||||||
| A0A2C9C360 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A2C9C360 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00624870 | ||||||||
| WBVar00624871 | |||||||||
| WBVar00624872 | |||||||||
| WBVar00624873 | |||||||||
| WBVar00624874 | |||||||||
| WBVar01931920 | |||||||||
| WBVar00624875 | |||||||||
| WBVar00624876 | |||||||||
| WBVar00624877 | |||||||||
| WBVar00624878 | |||||||||
| WBVar00624879 | |||||||||
| WBVar00624880 | |||||||||
| WBVar00624881 | |||||||||
| WBVar00624882 | |||||||||
| WBVar00624883 | |||||||||
| WBVar00624884 | |||||||||
| WBVar00624885 | |||||||||
| WBVar00624886 | |||||||||
| WBVar00624887 | |||||||||
| WBVar00624888 | |||||||||
| WBVar01415344 | |||||||||
| WBVar02009795 | |||||||||
| WBVar00259515 | |||||||||
| WBVar00310562 | |||||||||
| WBVar01342059 | |||||||||
| WBVar02091953 | |||||||||
| WBVar01846105 | |||||||||
| WBVar01846106 | |||||||||
| WBVar01398872 | |||||||||
| WBVar00296879 | |||||||||
| WBVar02028431 | |||||||||
| WBVar01493885 | |||||||||
| WBVar01499416 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01694729 | |||||||||
| WBVar01499985 | |||||||||
| WBVar00266942 | |||||||||
| WBVar01762257 | |||||||||
| WBVar01762258 | |||||||||
| WBVar01762259 | |||||||||
| WBVar02126821 | |||||||||
| WBVar02126822 | |||||||||
| WBVar02126823 | |||||||||
| WBVar01602900 | |||||||||
| WBVar00151922 | |||||||||
| WBVar01602901 | |||||||||
| WBVar00151923 | |||||||||
| WBVar01602902 | |||||||||
| WBVar01602903 | |||||||||
| WBVar01602904 | |||||||||
| WBVar01956665 | |||||||||
| WBVar01988421 | |||||||||
| WBVar00330030 | |||||||||
| WBVar00330031 | |||||||||
| WBVar00330032 | |||||||||
| WBVar00330033 | |||||||||
| WBVar00330034 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00013514 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00013515 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013516 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018282 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00020413 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in several structures, including Caaaaa; Caaaap; Caaapa; anterior hypodermis; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: DOMON domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E10A.17a | |||||||
| Y54E10A.17b | |||||||||
| Corresponding_transcript | Y54E10A.17a.1 | ||||||||
| Y54E10A.17b.1 | |||||||||
| Other_sequence | CJC07654_1 | ||||||||
| JI480683.1 | |||||||||
| MH09952 | |||||||||
| CJC05344_1 | |||||||||
| CR03828 | |||||||||
| CRC11661_1 | |||||||||
| Associated_feature | WBsf717473 | ||||||||
| WBsf983087 | |||||||||
| WBsf217375 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015508 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003705 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004842 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057004 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057345 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102588 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075580 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020426 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006799 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012899 | ||||||||
| Expr1039581 | |||||||||
| Expr1160782 | |||||||||
| Expr2007888 | |||||||||
| Expr2026130 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (153) | |||||||||
| Map_info | Positive | Positive_clone | Y54E10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -4.47305 | |||||||
| Method | Gene |
