WormBase Tree Display for Gene: WBGene00018282
expand all nodes | collapse all nodes | view schema
| WBGene00018282 | SMap | S_parent | Sequence | F41D9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F41D9.2 | |||||||
| Molecular_name | F41D9.2a | ||||||||
| F41D9.2a.1 | |||||||||
| CE10238 | |||||||||
| F41D9.2b | |||||||||
| CE41807 | |||||||||
| F41D9.2b.1 | |||||||||
| Other_name | CELE_F41D9.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F41D9.2 | ||||||||
| DB_info | Database | AceView | gene | XJ2 | |||||
| WormQTL | gene | WBGene00018282 | |||||||
| WormFlux | gene | WBGene00018282 | |||||||
| NDB | locus_tag | CELE_F41D9.2 | |||||||
| NCBI | gene | 185612 | |||||||
| RefSeq | protein | NM_077021.5 | |||||||
| NM_001129671.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF316889 | |||||||
| TrEMBL | UniProtAcc | A8WFM5 | |||||||
| H2KZN7 | |||||||||
| UniProt_GCRP | UniProtAcc | A8WFM5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00013514 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00013515 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00013516 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00021835 | |||||||||
| WBGene00020413 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapapapa; ABalapppapa; ABplpaaappa; ABprpaaappa; and rectal epithelial cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-four chemicals including rotenone; D-glucopyranose; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: DOMON domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F41D9.2a | |||||||
| F41D9.2b | |||||||||
| Corresponding_CDS_history | F41D9.2:wp184 | ||||||||
| Corresponding_transcript | F41D9.2a.1 | ||||||||
| F41D9.2b.1 | |||||||||
| Other_sequence | CBC14665_1 | ||||||||
| Hbac_isotig03813 | |||||||||
| CSC02346_1 | |||||||||
| FK806670.1 | |||||||||
| ES739584.1 | |||||||||
| FD516899.1 | |||||||||
| HBC11583_1 | |||||||||
| Associated_feature | WBsf654210 | ||||||||
| WBsf1006122 | |||||||||
| WBsf237676 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032087 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014739 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046983 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017704 | ||||||||
| Expr1037874 | |||||||||
| Expr1150846 | |||||||||
| Expr2003584 | |||||||||
| Expr2021803 | |||||||||
| Drives_construct | WBCnstr00026639 | ||||||||
| Construct_product | WBCnstr00026639 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (184) | |||||||||
| Map_info | Positive | Positive_clone | F41D9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -0.148632 | |||||||
| Method | Gene |
