WormBase Tree Display for Gene: WBGene00020413
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| WBGene00020413 | SMap | S_parent | Sequence | T10E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cpg-22 | Paper_evidence | WBPaper00053350 | |||||
| Sequence_name | T10E9.3 | ||||||||
| Molecular_name | T10E9.3 | ||||||||
| T10E9.3.1 | |||||||||
| CE30171 | |||||||||
| Other_name | CELE_T10E9.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | cpg-22 | ||||||||
| DB_info | Database | AceView | gene | 1H115 | |||||
| WormQTL | gene | WBGene00020413 | |||||||
| WormFlux | gene | WBGene00020413 | |||||||
| NDB | locus_tag | CELE_T10E9.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020413|UniProtKB=O01603 | |||||||
| family | PTHR36516 | ||||||||
| NCBI | gene | 172364 | |||||||
| RefSeq | protein | NM_059481.7 | |||||||
| TREEFAM | TREEFAM_ID | TF316889 | |||||||
| TrEMBL | UniProtAcc | O01603 | |||||||
| UniProt_GCRP | UniProtAcc | O01603 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jun 2020 18:04:10 | WBPerson1983 | Name_change | CGC_name | cpg-22 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cpg | ||||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00013514 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WBGene00013515 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00013516 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00018282 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00021835 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in accessory cell and hypodermis based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; RNA-seq; and microarray studies. Is affected by twenty-one chemicals including hydrogen sulfide; nicotinic acid; and manganese chloride based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domain: DOMON domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10E9.3 | |||||||
| Corresponding_transcript | T10E9.3.1 | ||||||||
| Other_sequence | CBC01384_1 | ||||||||
| PP00123 | |||||||||
| CBC17564_1 | |||||||||
| PPC05070_1 | |||||||||
| Associated_feature | WBsf643379 | ||||||||
| WBsf1009965 | |||||||||
| WBsf217847 | |||||||||
| WBsf217848 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004204 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035444 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053053 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022396 | ||||||||
| Expr1038903 | |||||||||
| Expr1156660 | |||||||||
| Expr2006082 | |||||||||
| Expr2024296 | |||||||||
| Drives_construct | WBCnstr00025160 | ||||||||
| Construct_product | WBCnstr00025160 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (219) | |||||||||
| Interaction | WBInteraction000305993 | ||||||||
| WBInteraction000408760 | |||||||||
| Map_info | Positive | Positive_clone | T10E9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 1.20989 | |||||||
| Method | Gene |
