WormBase Tree Display for Gene: WBGene00021537
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| WBGene00021537 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y42H9AR.2 | |||||||
| Molecular_name | Y42H9AR.2 | ||||||||
| Y42H9AR.2.1 | |||||||||
| CE44588 | |||||||||
| Other_name | Y42H9AR.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y42H9AR.2 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y42H9AR.2 | ||||||||
| DB_info | Database | AceView | gene | 4I867 | |||||
| 4I863 | |||||||||
| WormQTL | gene | WBGene00021537 | |||||||
| WormFlux | gene | WBGene00021537 | |||||||
| NDB | locus_tag | CELE_Y42H9AR.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021537|UniProtKB=Q9N3Y5 | |||||||
| family | PTHR23291 | ||||||||
| NCBI | gene | 189842 | |||||||
| RefSeq | protein | NM_068949.5 | |||||||
| TREEFAM | TREEFAM_ID | TF319996 | |||||||
| TrEMBL | UniProtAcc | Q9N3Y5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3Y5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00094088 | ||||||||
| 00094089 | |||||||||
| 00094090 | |||||||||
| 00094091 | |||||||||
| 00094092 | |||||||||
| 00094093 | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00006470 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006479 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009580 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019664 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in negative regulation of apoptotic signaling pathway. Predicted to be located in Golgi apparatus; endoplasmic reticulum; and membrane. Is an ortholog of human GRINA (glutamate ionotropic receptor NMDA type subunit associated protein 1) and TMBIM1 (transmembrane BAX inhibitor motif containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y42H9AR.2 | |||||||
| Corresponding_CDS_history | Y42H9AR.2:wp147 | ||||||||
| Y42H9AR.2:wp210 | |||||||||
| Y42H9AR.2:wp212 | |||||||||
| Corresponding_transcript | Y42H9AR.2.1 | ||||||||
| Other_sequence | Tcol_isotig21491 | ||||||||
| Tcir_isotig28796 | |||||||||
| Associated_feature | WBsf997135 | ||||||||
| WBsf997136 | |||||||||
| WBsf997137 | |||||||||
| WBsf228623 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037027 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056443 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056442 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019491 | ||||||||
| Expr1159919 | |||||||||
| Expr2007467 | |||||||||
| Expr2025704 | |||||||||
| Drives_construct | WBCnstr00024512 | ||||||||
| Construct_product | WBCnstr00024512 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Positive | Positive_clone | Y42H9AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.6011 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
