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WormBase Tree Display for Gene: WBGene00021519

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Name Class

WBGene00021519SMapS_parentSequenceY41D4B
IdentityVersion1
NameSequence_nameY41D4B.17
Molecular_nameY41D4B.17
Y41D4B.17.1
CE21858
Other_nameCELE_Y41D4B.17Accession_evidenceNDBBX284604
Public_nameY41D4B.17
DB_infoDatabaseAceViewgene4C325
WormQTLgeneWBGene00021519
WormFluxgeneWBGene00021519
NDBlocus_tagCELE_Y41D4B.17
PanthergeneCAEEL|WormBase=WBGene00021519|UniProtKB=Q95Y18
familyPTHR21733
NCBIgene176964
RefSeqproteinNM_067698.5
TREEFAMTREEFAM_IDTF315857
TrEMBLUniProtAccQ95Y18
UniProt_GCRPUniProtAccQ95Y18
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar00417620
WBVar00417621
WBVar01499166
WBVar01609088
WBVar01609089
WBVar01609090
WBVar01609091
WBVar01609092
WBVar00887529
WBVar00887530
WBVar00887531
WBVar00887532
WBVar00887533
WBVar00887534
WBVar00887535
WBVar00887536
WBVar00887537
WBVar00887538
WBVar00887539
WBVar00887540
WBVar00887541
WBVar00887542
WBVar00887543
WBVar01648251
WBVar01687372
WBVar01803042
WBVar01687373
WBVar01450791
WBVar01984854
WBVar01450792
WBVar01499633
WBVar02114829
WBVar02114830
WBVar02114831
WBVar01725494
WBVar01725495
WBVar01725496
WBVar02048135
WBVar01853046
WBVar01853047
WBVar01853048
WBVar01853049
WBVar01853050
WBVar01853051
WBVar01853052
WBVar01853053
WBVar02055774
WBVar01853054
WBVar01853055
WBVar01853056
WBVar01500231
WBVar01853057
WBVar01853058
WBVar01853059
WBVar01853060
WBVar01853061
WBVar01853062
WBVar01853063
WBVar01853064
WBVar01853065
WBVar01853066
WBVar01853067
WBVar01853068
WBVar01853069
WBVar00417618
WBVar00417619
RNASeq_FPKM (74)
Contained_in_operonCEOP4641
OrthologWBGene00078935Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g10790Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP29.g21746Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9564Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g15562Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15563Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4397Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
chrIV_pilon.g9698Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00007097Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008698Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008699Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00012947Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015259Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016257Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00016424Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016425Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018823Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019659Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019660Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021517Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021518Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022644Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022645Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044073Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044723Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044457Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021589Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021590Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00271804Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalppappa; ABarappppa; intestine; male distal tip cell; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including methylmercuric chloride; mianserin; and D-glucopyranose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Transmembrane glycoprotein.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY41D4B.17
Corresponding_transcriptY41D4B.17.1
Associated_featureWBsf645800
WBsf227954
Experimental_infoRNAi_resultWBRNAi00056386Inferred_automaticallyRNAi_primary
WBRNAi00000846Inferred_automaticallyRNAi_primary
WBRNAi00020493Inferred_automaticallyRNAi_primary
WBRNAi00056385Inferred_automaticallyRNAi_primary
Expr_patternExpr1028084
Expr1039408
Expr1159871
Expr2007444
Expr2025680
Microarray_results (15)
Expression_cluster (214)
Map_infoPositivePositive_cloneY41D4BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV-17.8085
MethodGene