WormBase Tree Display for Gene: WBGene00012947
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| WBGene00012947 | SMap | S_parent | Sequence | Y47H9C | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y47H9C.1 | |||||||
| Molecular_name | Y47H9C.1 | ||||||||
| Y47H9C.1.1 | |||||||||
| CE20262 | |||||||||
| Other_name | CELE_Y47H9C.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y47H9C.1 | ||||||||
| DB_info | Database | AceView | gene | 1M424 | |||||
| WormQTL | gene | WBGene00012947 | |||||||
| WormFlux | gene | WBGene00012947 | |||||||
| NDB | locus_tag | CELE_Y47H9C.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012947|UniProtKB=Q9XWE2 | |||||||
| family | PTHR21733 | ||||||||
| NCBI | gene | 173061 | |||||||
| RefSeq | protein | NM_060605.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315857 | |||||||
| TrEMBL | UniProtAcc | Q9XWE2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWE2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (44) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; head mesodermal cell; intestine; and pharyngeal muscle cell based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-one chemicals including Heme; hydrogen sulfide; and Nitric Oxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Transmembrane glycoprotein. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47H9C.1 | |||||||
| Corresponding_transcript | Y47H9C.1.1 | ||||||||
| Other_sequence | CRC03684_1 | ||||||||
| Associated_feature | WBsf985400 | ||||||||
| WBsf1010796 | |||||||||
| WBsf220369 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037204 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004661 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056838 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010684 | ||||||||
| Expr1160295 | |||||||||
| Expr2007644 | |||||||||
| Expr2025883 | |||||||||
| Drives_construct | WBCnstr00029778 | ||||||||
| Construct_product | WBCnstr00029778 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (280) | |||||||||
| Interaction | WBInteraction000200982 | ||||||||
| WBInteraction000431386 | |||||||||
| WBInteraction000524307 | |||||||||
| WBInteraction000571158 | |||||||||
| Map_info | Positive | Positive_clone | Y47H9C | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 10.9833 | |||||||
| Method | Gene |
