WormBase Tree Display for Gene: WBGene00021517
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| WBGene00021517 | SMap | S_parent | Sequence | Y41D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y41D4B.15 | |||||||
| Molecular_name | Y41D4B.15 | ||||||||
| Y41D4B.15.1 | |||||||||
| CE46665 | |||||||||
| Other_name | CELE_Y41D4B.15 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y41D4B.15 | ||||||||
| DB_info | Database | AceView | gene | 4C329 | |||||
| WormQTL | gene | WBGene00021517 | |||||||
| WormFlux | gene | WBGene00021517 | |||||||
| NDB | locus_tag | CELE_Y41D4B.15 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021517|UniProtKB=Q95Y16 | |||||||
| family | PTHR21733 | ||||||||
| NCBI | gene | 189822 | |||||||
| RefSeq | protein | NM_067700.4 | |||||||
| TREEFAM | TREEFAM_ID | TF315857 | |||||||
| TrEMBL | UniProtAcc | Q95Y16 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y16 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (94) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00078934 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| CBOVI.g7155 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP28.g17378 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g21748 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP38.g15564 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP38.g15565 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP39.g4399 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| GCK72_016342 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_40055400 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g9700 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (21) | |||||||||
| Structured_description | Automated_description | Enriched in Z1.p; Z4.a; intestine; male distal tip cell; and mechanosensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including tryptophan; Tunicamycin; and multi-walled carbon nanotube based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Transmembrane glycoprotein. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41D4B.15 | |||||||
| Corresponding_CDS_history | Y41D4B.15:wp88 | ||||||||
| Y41D4B.15:wp202 | |||||||||
| Y41D4B.15:wp228 | |||||||||
| Corresponding_transcript | Y41D4B.15.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020495 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00089363 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088693 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088586 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056383 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020494 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095231 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020028 | ||||||||
| Expr1159869 | |||||||||
| Expr2007443 | |||||||||
| Expr2025679 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (149) | |||||||||
| Map_info | Positive | Positive_clone | Y41D4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -17.6357 | |||||||
| Method | Gene |
