WormBase Tree Display for Gene: WBGene00021171
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| WBGene00021171 | SMap | S_parent | Sequence | Y8A9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y8A9A.2 | |||||||
| Molecular_name | Y8A9A.2 | ||||||||
| Y8A9A.2.1 | |||||||||
| CE53975 | |||||||||
| Other_name | CELE_Y8A9A.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y8A9A.2 | ||||||||
| DB_info | Database | AceView | gene | 2E89 | |||||
| WormQTL | gene | WBGene00021171 | |||||||
| WormFlux | gene | WBGene00021171 | |||||||
| NDB | locus_tag | CELE_Y8A9A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021171|UniProtKB=Q9TYK4 | |||||||
| family | PTHR13723 | ||||||||
| NCBI | gene | 173723 | |||||||
| RefSeq | protein | NM_001377769.2 | |||||||
| TREEFAM | TREEFAM_ID | TF316744 | |||||||
| TrEMBL | UniProtAcc | Q9TYK4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TYK4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (117) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00000082 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000083 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001650 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003242 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009958 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020567 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00086562 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00003248 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Expressed in g1P; g2L; and g2R. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; and Thrombospondin type 1 domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y8A9A.2 | |||||||
| Corresponding_CDS_history | Y8A9A.2:wp234 | ||||||||
| Y8A9A.2:wp274 | |||||||||
| Corresponding_transcript | Y8A9A.2.1 | ||||||||
| Other_sequence | CRC02076_1 | ||||||||
| PP01944 | |||||||||
| CR04518 | |||||||||
| CR05865 | |||||||||
| Tcir_isotig15096 | |||||||||
| PPC02557_1 | |||||||||
| Associated_feature | WBsf987388 | ||||||||
| WBsf987389 | |||||||||
| WBsf987390 | |||||||||
| WBsf1011969 | |||||||||
| WBsf221045 | |||||||||
| WBsf221046 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058613 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021527 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10175 | ||||||||
| Expr1026225 | |||||||||
| Expr1039234 | |||||||||
| Expr1162035 | |||||||||
| Expr2008495 | |||||||||
| Expr2026733 | |||||||||
| Drives_construct | WBCnstr00015505 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (151) | |||||||||
| Interaction (53) | |||||||||
| Map_info | Positive | Positive_clone | Y8A9A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -6.21111 | |||||||
| Reference | WBPaper00032277 | ||||||||
| WBPaper00039684 | |||||||||
| WBPaper00041256 | |||||||||
| Method | Gene |
