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WormBase Tree Display for Gene: WBGene00021171

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Name Class

WBGene00021171SMapS_parentSequenceY8A9A
IdentityVersion1
NameSequence_nameY8A9A.2
Molecular_nameY8A9A.2
Y8A9A.2.1
CE53975
Other_nameCELE_Y8A9A.2Accession_evidenceNDBBX284602
Public_nameY8A9A.2
DB_infoDatabaseAceViewgene2E89
WormQTLgeneWBGene00021171
WormFluxgeneWBGene00021171
NDBlocus_tagCELE_Y8A9A.2
PanthergeneCAEEL|WormBase=WBGene00021171|UniProtKB=Q9TYK4
familyPTHR13723
NCBIgene173723
RefSeqproteinNM_001377769.2
TREEFAMTREEFAM_IDTF316744
TrEMBLUniProtAccQ9TYK4
UniProt_GCRPUniProtAccQ9TYK4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (117)
RNASeq_FPKM (74)
Ortholog (33)
ParalogWBGene00000082Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000083Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001650Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003242Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009958Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00020567Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00086562Caenorhabditis elegansFrom_analysisPanther
WBGene00003248Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionExpressed in g1P; g2L; and g2R. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; and Thrombospondin type 1 domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY8A9A.2
Corresponding_CDS_historyY8A9A.2:wp234
Y8A9A.2:wp274
Corresponding_transcriptY8A9A.2.1
Other_sequenceCRC02076_1
PP01944
CR04518
CR05865
Tcir_isotig15096
PPC02557_1
Associated_featureWBsf987388
WBsf987389
WBsf987390
WBsf1011969
WBsf221045
WBsf221046
Experimental_infoRNAi_resultWBRNAi00058613Inferred_automaticallyRNAi_primary
WBRNAi00021527Inferred_automaticallyRNAi_primary
Expr_patternExpr10175
Expr1026225
Expr1039234
Expr1162035
Expr2008495
Expr2026733
Drives_constructWBCnstr00015505
Microarray_results (17)
Expression_cluster (151)
InteractionWBInteraction000212705
WBInteraction000219939
WBInteraction000228622
WBInteraction000244313
WBInteraction000248669
WBInteraction000250922
WBInteraction000256146
WBInteraction000262554
WBInteraction000265141
WBInteraction000269448
WBInteraction000283774
WBInteraction000293604
WBInteraction000293898
WBInteraction000294321
WBInteraction000295814
WBInteraction000297474
WBInteraction000305985
WBInteraction000306966
WBInteraction000312305
WBInteraction000318973
WBInteraction000323484
WBInteraction000334374
WBInteraction000350966
WBInteraction000353593
WBInteraction000356769
WBInteraction000364323
WBInteraction000369799
WBInteraction000371447
WBInteraction000377338
WBInteraction000377521
WBInteraction000377689
WBInteraction000379619
WBInteraction000389652
WBInteraction000392876
WBInteraction000397079
WBInteraction000399107
WBInteraction000399362
WBInteraction000401439
WBInteraction000405695
WBInteraction000408041
WBInteraction000408137
WBInteraction000408811
WBInteraction000428555
WBInteraction000446294
WBInteraction000447858
WBInteraction000449220
WBInteraction000451365
WBInteraction000452699
WBInteraction000456145
WBInteraction000456785
WBInteraction000460713
WBInteraction000461425
WBInteraction000518811
Map_infoPositivePositive_cloneY8A9AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-6.21111
ReferenceWBPaper00032277
WBPaper00039684
WBPaper00041256
MethodGene