WormBase Tree Display for Gene: WBGene00021113
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WBGene00021113 | SMap | S_parent | Sequence | W09C3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | gsp-3 | Person_evidence | WBPerson374 | |||||
Sequence_name | W09C3.6 | ||||||||
Molecular_name | W09C3.6 | ||||||||
W09C3.6.1 | |||||||||
CE14754 | |||||||||
W09C3.6.2 | |||||||||
Other_name | CELE_W09C3.6 | Accession_evidence | NDB | BX284601 | |||||
Public_name | gsp-3 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 15 Sep 2004 14:17:37 | WBPerson1971 | Name_change | CGC_name | gsp-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | gsp | ||||||||
Allele (24) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (28) | |||||||||
Ortholog (58) | |||||||||
Paralog (45) | |||||||||
Structured_description | Concise_description | gsp-3 encodes an ortholog of protein phosphatase 1 gamma, a Glc7/PP1 phosphatase (HGNC:PPP1CA); GSP-3 is nearly identical to GSP-4, and the two proteins appear to function redundantly during sperm development; GSP-3/4 activity is required for chromosome partitioning during sperm meiosis and for sperm motility, specifically for pseudopod development and a normal rate of pseudopodial treadmilling; in regulating sperm development, GSP-3/4 functions upstream of, and regulates the localization of, the major sperm proteins (MSPs); GSP-3/4 may also play a role in egg laying; GSP-3/4 is expresed at high levels in sperm, with strong localization seen around meiotic and mature sperm DNA. | Paper_evidence | WBPaper00040337 | |||||
WBPaper00028451 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson324 | |||||||||
Date_last_updated | 10 Nov 2014 00:00:00 | ||||||||
Automated_description | Predicted to enable protein serine/threonine phosphatase activity. Involved in regulation of pseudopodium assembly and reproductive process. Located in cytoplasm and pseudopodium. Part of chromatin. Expressed in sperm. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W09C3.6 | |||||||
Corresponding_transcript | W09C3.6.1 | ||||||||
W09C3.6.2 | |||||||||
Other_sequence (96) | |||||||||
Associated_feature | WBsf219312 | ||||||||
Experimental_info | RNAi_result (12) | ||||||||
Expr_pattern | Expr4209 | ||||||||
Expr9883 | |||||||||
Expr13145 | |||||||||
Expr1158562 | |||||||||
Expr2012288 | |||||||||
Expr2030524 | |||||||||
Drives_construct | WBCnstr00024681 | ||||||||
Construct_product | WBCnstr00024681 | ||||||||
Antibody | WBAntibody00001141 | ||||||||
WBAntibody00001142 | |||||||||
WBAntibody00001143 | |||||||||
WBAntibody00001144 | |||||||||
WBAntibody00002730 | |||||||||
Microarray_results (13) | |||||||||
Expression_cluster (257) | |||||||||
Interaction (253) | |||||||||
Map_info | Map | I | Position | -0.840203 | Error | 0.020153 | |||
Positive | Positive_clone | W09C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4936 | |||||||
5620 | |||||||||
Pseudo_map_position | |||||||||
Reference (23) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |