WormBase Tree Display for Gene: WBGene00021113
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| WBGene00021113 | SMap | S_parent | Sequence | W09C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gsp-3 | Person_evidence | WBPerson374 | |||||
| Sequence_name | W09C3.6 | ||||||||
| Molecular_name | W09C3.6 | ||||||||
| W09C3.6.1 | |||||||||
| CE14754 | |||||||||
| W09C3.6.2 | |||||||||
| Other_name | CELE_W09C3.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gsp-3 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 15 Sep 2004 14:17:37 | WBPerson1971 | Name_change | CGC_name | gsp-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gsp | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00027364 | ||||||||
| 00027365 | |||||||||
| 00027366 | |||||||||
| 00027367 | |||||||||
| 00027368 | |||||||||
| 00027369 | |||||||||
| 00027370 | |||||||||
| 00027371 | |||||||||
| 00027372 | |||||||||
| 00027373 | |||||||||
| 00027374 | |||||||||
| 00027375 | |||||||||
| 00027376 | |||||||||
| 00027377 | |||||||||
| 00027378 | |||||||||
| 00027379 | |||||||||
| 00027380 | |||||||||
| 00027381 | |||||||||
| 00027382 | |||||||||
| 00027383 | |||||||||
| 00027384 | |||||||||
| 00027385 | |||||||||
| 00027386 | |||||||||
| 00027387 | |||||||||
| 00027388 | |||||||||
| 00027389 | |||||||||
| 00027390 | |||||||||
| 00125562 | |||||||||
| Ortholog (58) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Concise_description | gsp-3 encodes an ortholog of protein phosphatase 1 gamma, a Glc7/PP1 phosphatase (HGNC:PPP1CA); GSP-3 is nearly identical to GSP-4, and the two proteins appear to function redundantly during sperm development; GSP-3/4 activity is required for chromosome partitioning during sperm meiosis and for sperm motility, specifically for pseudopod development and a normal rate of pseudopodial treadmilling; in regulating sperm development, GSP-3/4 functions upstream of, and regulates the localization of, the major sperm proteins (MSPs); GSP-3/4 may also play a role in egg laying; GSP-3/4 is expresed at high levels in sperm, with strong localization seen around meiotic and mature sperm DNA. | Paper_evidence | WBPaper00040337 | |||||
| WBPaper00028451 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 10 Nov 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable protein serine/threonine phosphatase activity. Involved in regulation of pseudopodium assembly and reproductive process. Located in cytoplasm and pseudopodium. Part of chromatin. Expressed in sperm. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W09C3.6 | |||||||
| Corresponding_transcript | W09C3.6.1 | ||||||||
| W09C3.6.2 | |||||||||
| Other_sequence (96) | |||||||||
| Associated_feature | WBsf219312 | ||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr4209 | ||||||||
| Expr9883 | |||||||||
| Expr13145 | |||||||||
| Expr1158562 | |||||||||
| Expr2012288 | |||||||||
| Expr2030524 | |||||||||
| Drives_construct | WBCnstr00024681 | ||||||||
| Construct_product | WBCnstr00024681 | ||||||||
| Antibody | WBAntibody00001141 | ||||||||
| WBAntibody00001142 | |||||||||
| WBAntibody00001143 | |||||||||
| WBAntibody00001144 | |||||||||
| WBAntibody00002730 | |||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (257) | |||||||||
| Interaction (253) | |||||||||
| Map_info | Map | I | Position | -0.840203 | Error | 0.020153 | |||
| Positive | Positive_clone | W09C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4936 | |||||||
| 5620 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (23) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
