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WormBase Tree Display for Gene: WBGene00021085

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Name Class

WBGene00021085SMapS_parentSequenceW08E12
IdentityVersion1
NameSequence_nameW08E12.4
Molecular_nameW08E12.4
W08E12.4.1
CE21277
Other_nameCELE_W08E12.4Accession_evidenceNDBBX284604
Public_nameW08E12.4
DB_infoDatabaseAceViewgene4E67
WormQTLgeneWBGene00021085
WormFluxgeneWBGene00021085
NDBlocus_tagCELE_W08E12.4
PanthergeneCAEEL|WormBase=WBGene00021085|UniProtKB=G5ECD4
familyPTHR36941
NCBIgene189292
RefSeqproteinNM_067913.4
TREEFAMTREEFAM_IDTF322153
TrEMBLUniProtAccG5ECD4
UniProt_GCRPUniProtAccG5ECD4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (2)
RNASeq_FPKM (74)
Ortholog (39)
ParalogWBGene00021083Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021084Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021086Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00235264Caenorhabditis elegansFrom_analysisPanther
WBGene00021087Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionExpressed in pharynx and pm8.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW08E12.4
Corresponding_transcriptW08E12.4.1
Associated_featureWBsf645867
WBsf1017050
WBsf228086
WBsf228087
Experimental_infoRNAi_resultWBRNAi00019722Inferred_automaticallyRNAi_primary
WBRNAi00019721Inferred_automaticallyRNAi_primary
WBRNAi00054984Inferred_automaticallyRNAi_primary
WBRNAi00036380Inferred_automaticallyRNAi_primary
WBRNAi00054985Inferred_automaticallyRNAi_primary
Expr_patternExpr14258
Expr1024445
Expr1039198
Expr1158517
Expr2006855
Expr2025080
Drives_constructWBCnstr00040688
Microarray_resultsSMD_W08E12.H
172503_x_at
172545_x_at
Aff_W08E12_12.G
Expression_clusterWBPaper00032003:ced-1(e1735)_upregulated
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00044857:BAR-1_downregulated
WBPaper00045257:bar-1(ga80)_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050109:rBmTX14_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00053020:sid-3(ok973)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053771:down_by_skn-1(RNAi)_at_24h-NaCl
WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
WBPaper00054191:H3.3(null)_L1_downregulated
WBPaper00054410:set-26(tm2467)_upregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055944:C.butyricum_vs_OP50_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056290:mdt-15(mg584)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
WBPaper00061007:HB101_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061340:Arcade_cell_anterior_and_posterior
WBPaper00061527:abu-7-abu-8_22491
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00065029:cadmium_downregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065759:dot-1.1(knu339)_upregulated
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4386_cluster_2_4
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030839:Larval_A_Class
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031703:heme_responsive_7
WBPaper00031832:slr-2_regulated
WBPaper00032948:FedUp
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036375:depleted_in_PVD_OLL
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:crh-1null_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038304:octr-1_regulated
WBPaper00040185:nhr-23(RNAi)_downregulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00048989:eat-2(ad465)_downregulated_in-DMSO
WBPaper00049311:sAg-MNP_regulated
WBPaper00053550:daf-19(m86)_downregulated_L1
WBPaper00057098:SiO2-nanoparticles_upregulated
InteractionWBInteraction000548544
Map_infoPositivePositive_cloneW08E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV-4.7635
ReferenceWBPaper00043845
WBPaper00055676
MethodGene