WormBase Tree Display for Gene: WBGene00020693
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| WBGene00020693 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lron-8 | Person_evidence | WBPerson637 | |||||
| Sequence_name | T22E7.1 | ||||||||
| Molecular_name | T22E7.1a | ||||||||
| T22E7.1a.1 | |||||||||
| CE31368 | |||||||||
| T22E7.1b | |||||||||
| CE33189 | |||||||||
| T22E7.1b.1 | |||||||||
| Other_name | CELE_T22E7.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | lron-8 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Dec 2011 15:47:23 | WBPerson2970 | Name_change | CGC_name | lron-8 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lron | ||||||||
| Allele (49) | |||||||||
| Strain | WBStrain00047619 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00083597 | ||||||||
| 00083598 | |||||||||
| 00095371 | |||||||||
| Ortholog (49) | |||||||||
| Paralog | WBGene00004854 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00007261 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013542 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022129 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be located in extracellular matrix and extracellular space. Expressed in body wall musculature; head muscle; pharynx; and rectal gland cell. Human ortholog(s) of this gene implicated in several diseases, including autosomal recessive intellectual developmental disorder 64; congenital stationary night blindness 1A; and stomach cancer. Is an ortholog of several human genes including LRRN1 (leucine rich repeat neuronal 1); LRRN2 (leucine rich repeat neuronal 2); and LRRN3 (leucine rich repeat neuronal 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110870 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8082) | ||||
| DOID:1686 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21205) | ||||||
| DOID:0081225 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21205) | ||||||
| DOID:10534 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20980) | ||||||
| DOID:8499 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8082) | ||||||
| Molecular_info | Corresponding_CDS | T22E7.1a | |||||||
| T22E7.1b | |||||||||
| Corresponding_transcript | T22E7.1a.1 | ||||||||
| T22E7.1b.1 | |||||||||
| Other_sequence | FD517495.1 | ||||||||
| CSC02279_1 | |||||||||
| Associated_feature | WBsf643311 | ||||||||
| WBsf983767 | |||||||||
| WBsf217708 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028132 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002855 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053838 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019030 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053839 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9904 | ||||||||
| Expr1025304 | |||||||||
| Expr1039013 | |||||||||
| Expr1157389 | |||||||||
| Expr2013281 | |||||||||
| Expr2031512 | |||||||||
| Drives_construct | WBCnstr00014390 | ||||||||
| WBCnstr00024955 | |||||||||
| Construct_product | WBCnstr00014390 | ||||||||
| WBCnstr00024955 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction | WBInteraction000566467 | ||||||||
| WBInteraction000566746 | |||||||||
| Map_info | Map | I | Position | 0.445629 | |||||
| Positive | Positive_clone | T22E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
