WormBase Tree Display for Gene: WBGene00007261
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WBGene00007261 | SMap | S_parent | Sequence | C02C6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | lron-3 | Person_evidence | WBPerson637 | |||||
Sequence_name | C02C6.3 | ||||||||
Molecular_name (12) | |||||||||
Other_name | CELE_C02C6.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | lron-3 | ||||||||
DB_info | Database | AceView | gene | XQ166 | |||||
WormQTL | gene | WBGene00007261 | |||||||
WormFlux | gene | WBGene00007261 | |||||||
NDB | locus_tag | CELE_C02C6.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007261|UniProtKB=Q93177 | |||||||
family | PTHR24364 | ||||||||
NCBI | gene | 181643 | |||||||
RefSeq | protein | NM_001373599.5 | |||||||
NM_001129621.4 | |||||||||
NM_001129620.4 | |||||||||
NM_001373598.2 | |||||||||
TREEFAM | TREEFAM_ID | TF351115 | |||||||
TrEMBL | UniProtAcc | A6ZJ74 | |||||||
Q2XMZ4 | |||||||||
Q93177 | |||||||||
A6ZJ75 | |||||||||
UniProt_GCRP | UniProtAcc | Q93177 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 09 Dec 2011 15:47:23 | WBPerson2970 | Name_change | CGC_name | lron-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lron | ||||||||
Allele (237) | |||||||||
Strain | WBStrain00002511 | ||||||||
WBStrain00032664 | |||||||||
WBStrain00047595 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00005039 | ||||||||
00005040 | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00004854 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00013542 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00020693 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00022129 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human TPBG (trophoblast glycoprotein). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C02C6.3a | |||||||
C02C6.3b | |||||||||
C02C6.3c | |||||||||
C02C6.3d | |||||||||
Corresponding_CDS_history | C02C6.3:wp64 | ||||||||
C02C6.3a:wp271 | |||||||||
Corresponding_transcript | C02C6.3a.1 | ||||||||
C02C6.3b.1 | |||||||||
C02C6.3c.1 | |||||||||
C02C6.3d.1 | |||||||||
Other_sequence | CR04120 | ||||||||
CRC08122_1 | |||||||||
FE922549.1 | |||||||||
Dviv_isotig20906 | |||||||||
Oden_isotig19569 | |||||||||
MH06068 | |||||||||
Dviv_isotig20905 | |||||||||
MHC02584_1 | |||||||||
FC551207.1 | |||||||||
ACC32590_1 | |||||||||
Associated_feature (24) | |||||||||
Experimental_info | RNAi_result | WBRNAi00039409 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033565 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00009983 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1539 | ||||||||
Expr1019470 | |||||||||
Expr1033133 | |||||||||
Expr1143525 | |||||||||
Expr2013276 | |||||||||
Expr2031507 | |||||||||
Drives_construct | WBCnstr00003091 | ||||||||
WBCnstr00033876 | |||||||||
Construct_product | WBCnstr00033876 | ||||||||
Microarray_results (30) | |||||||||
Expression_cluster (146) | |||||||||
Interaction | WBInteraction000311796 | ||||||||
WBInteraction000566466 | |||||||||
WBInteraction000566745 | |||||||||
Map_info | Map | X | Position | 22.8367 | |||||
Positive | Positive_clone | C02C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |