WormBase Tree Display for Gene: WBGene00020562

WBGene00020562 SMap: S_parent: Sequence: T19C3
  Identity: Version: 1
    Name: Sequence_name: T19C3.4
      Molecular_name: T19C3.4
        T19C3.4.1
        CE02055
      Other_name: CELE_T19C3.4 Accession_evidence: NDB BX284603
      Public_name: T19C3.4
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01254786
      WBVar00250991
      WBVar01254787
      WBVar01254788
      WBVar01903279
      WBVar01500082
      WBVar02030092
      WBVar02030093
      WBVar01443142
      WBVar01443143
      WBVar01443144
      WBVar01443145
      WBVar00030648
      WBVar00798241
      WBVar00798242
      WBVar00798243
      WBVar00798244
      WBVar00798245
      WBVar00798246
      WBVar01564158
      WBVar00798247
      WBVar01498832
      WBVar00798248
      WBVar00798249
      WBVar00798250
      WBVar00798251
      WBVar00798252
      WBVar00798253
      WBVar00798254
      WBVar00798255
      WBVar00258421
      WBVar00798256
      WBVar00388258
      WBVar00388259
      WBVar00388260
      WBVar00388261
      WBVar01499792
      WBVar01499793
      WBVar00254249
      WBVar02117600
      WBVar01768918
      WBVar00005706
      WBVar01768919
      WBVar01768920
      WBVar00005711
      WBVar01768921
      WBVar01768922
      WBVar01768923
      WBVar00297176
      WBVar00005716
      WBVar01768924
      WBVar01768925
      WBVar01768926
      WBVar01768927
      WBVar01768928
      WBVar01768929
      WBVar01768930
      WBVar01768931
      WBVar01951118
      WBVar01951119
      WBVar02069479
      WBVar02069480
    RNASeq_FPKM (74)
    GO_annotation: 00055874
      00055875
      00055876
      00055877
      00055878
      00055879
      00055880
    Ortholog (50)
    Paralog: WBGene00011401 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012180 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015518 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018930 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022452 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022127 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable microtubule binding activity. Predicted to be involved in endoplasmic reticulum tubular network organization. Predicted to be located in cytoplasmic microtubule; endoplasmic reticulum membrane; and endoplasmic reticulum tubular network. Human ortholog(s) of this gene implicated in distal hereditary motor neuronopathy type 5B; hereditary spastic paraplegia 31; and hereditary spastic paraplegia 72. Is an ortholog of human REEP1 (receptor accessory protein 1) and REEP4 (receptor accessory protein 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: EFO:MONDO:0015363 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:25786)
      DOID:0110817 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:17975)
      DOID:0111205 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:25786)
      DOID:0110782 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:25786)
  Molecular_info: Corresponding_CDS: T19C3.4
    Corresponding_transcript: T19C3.4.1
    Other_sequence (27)
    Associated_feature: WBsf717855
      WBsf717856
      WBsf991105
      WBsf1014098
      WBsf226114
  Experimental_info: RNAi_result: WBRNAi00035656 Inferred_automatically: RNAi_primary
      WBRNAi00053507 Inferred_automatically: RNAi_primary
      WBRNAi00006621 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027058
      Expr1038963
      Expr1157074
      Expr2006247
      Expr2024465
    Drives_construct: WBCnstr00025049
    Construct_product: WBCnstr00025049
    Microarray_results (18)
    Expression_cluster (110)
    Interaction: WBInteraction000151374
      WBInteraction000264448
      WBInteraction000267730
      WBInteraction000356250
      WBInteraction000385891
      WBInteraction000581171
  Map_info: Positive: Positive_clone: T19C3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -26.5073
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene