WormBase Tree Display for Gene: WBGene00018930
expand all nodes | collapse all nodes | view schema
| WBGene00018930 | SMap | S_parent | Sequence | F56B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F56B3.6 | |||||||
| Molecular_name | F56B3.6 | ||||||||
| F56B3.6.1 | |||||||||
| CE17887 | |||||||||
| Other_name | CELE_F56B3.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F56B3.6 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (79) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033890 | ||||||||
| 00033891 | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00011401 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012180 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015518 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020562 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022127 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022452 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Human ortholog(s) of this gene implicated in retinitis pigmentosa 77. Is an ortholog of human REEP5 (receptor accessory protein 5) and REEP6 (receptor accessory protein 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080350 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30078) | ||||
| Molecular_info | Corresponding_CDS | F56B3.6 | |||||||
| Corresponding_transcript | F56B3.6.1 | ||||||||
| Other_sequence | CBC15016_1 | ||||||||
| CJC10318_1 | |||||||||
| Dviv_isotig19274 | |||||||||
| CRC01636_1 | |||||||||
| Associated_feature | WBsf659897 | ||||||||
| WBsf995273 | |||||||||
| WBsf1016614 | |||||||||
| WBsf227881 | |||||||||
| WBsf227882 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048639 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032928 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048637 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020717 | ||||||||
| Expr1152403 | |||||||||
| Expr2004274 | |||||||||
| Expr2022496 | |||||||||
| Drives_construct | WBCnstr00026188 | ||||||||
| Construct_product | WBCnstr00026188 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (155) | |||||||||
| Interaction | WBInteraction000285479 | ||||||||
| Map_info | Positive | Positive_clone | F56B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -23.4744 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
