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WormBase Tree Display for Gene: WBGene00020562

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Name Class

WBGene00020562SMapS_parentSequenceT19C3
IdentityVersion1
NameSequence_nameT19C3.4
Molecular_nameT19C3.4
T19C3.4.1
CE02055
Other_nameCELE_T19C3.4Accession_evidenceNDBBX284603
Public_nameT19C3.4
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (62)
RNASeq_FPKM (74)
GO_annotation00055874
00055875
00055876
00055877
00055878
00055879
00055880
Ortholog (50)
ParalogWBGene00011401Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012180Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015518Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018930Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022452Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022127Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable microtubule binding activity. Predicted to be involved in endoplasmic reticulum tubular network organization. Predicted to be located in cytoplasmic microtubule; endoplasmic reticulum membrane; and endoplasmic reticulum tubular network. Human ortholog(s) of this gene implicated in distal hereditary motor neuronopathy type 5B; hereditary spastic paraplegia 31; and hereditary spastic paraplegia 72. Is an ortholog of human REEP1 (receptor accessory protein 1) and REEP4 (receptor accessory protein 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelEFO:MONDO:0015363Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:25786)
DOID:0110817Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17975)
DOID:0111205Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:25786)
DOID:0110782Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:25786)
Molecular_infoCorresponding_CDST19C3.4
Corresponding_transcriptT19C3.4.1
Other_sequence (27)
Associated_featureWBsf717855
WBsf717856
WBsf991105
WBsf1014098
WBsf226114
Experimental_infoRNAi_resultWBRNAi00035656Inferred_automaticallyRNAi_primary
WBRNAi00053507Inferred_automaticallyRNAi_primary
WBRNAi00006621Inferred_automaticallyRNAi_primary
Expr_patternExpr1027058
Expr1038963
Expr1157074
Expr2006247
Expr2024465
Drives_constructWBCnstr00025049
Construct_productWBCnstr00025049
Microarray_results (18)
Expression_cluster (110)
InteractionWBInteraction000151374
WBInteraction000264448
WBInteraction000267730
WBInteraction000356250
WBInteraction000385891
WBInteraction000581171
Map_infoPositivePositive_cloneT19C3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-26.5073
ReferenceWBPaper00038491
WBPaper00055090
MethodGene