WormBase Tree Display for Gene: WBGene00020382

WBGene00020382 SMap: S_parent: Sequence: T09B4
  Identity: Version: 1
    Name: Sequence_name: T09B4.8
      Molecular_name: T09B4.8
        T09B4.8.1
        CE33176
      Other_name: CELE_T09B4.8 Accession_evidence: NDB BX284601
      Public_name: T09B4.8
    DB_info: Database: AceView gene 1G742
        WormQTL gene WBGene00020382
        WormFlux gene WBGene00020382
        NDB locus_tag CELE_T09B4.8
        Panther gene CAEEL|WormBase=WBGene00020382|UniProtKB=O02158
          family PTHR45688
        NCBI gene 172301
        RefSeq protein NM_059376.11
        TREEFAM TREEFAM_ID TF105945
        TrEMBL UniProtAcc O02158
        UniProt_GCRP UniProtAcc O02158
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (22)
    Strain: WBStrain00001402
      WBStrain00002393
    RNASeq_FPKM (74)
    GO_annotation: 00026651
      00026652
      00026653
      00026654
      00026655
      00026656
      00125016
      00125017
    Ortholog (37)
    Paralog: WBGene00001794 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015814 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020139 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable alanine-glyoxylate transaminase activity. Predicted to be involved in L-alanine catabolic process, by transamination and glyoxylate catabolic process. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); atrial fibrillation; and mild cognitive impairment. Is an ortholog of human AGXT2 (alanine--glyoxylate aminotransferase 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:6000 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14412)
      DOID:3669 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14412)
      DOID:3526 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14412)
      DOID:0080832 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14412)
      DOID:0060224 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14412)
      DOID:3393 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14412)
      DOID:10763 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14412)
  Molecular_info: Corresponding_CDS: T09B4.8
    Corresponding_CDS_history: T09B4.8:wp92
    Corresponding_transcript: T09B4.8.1
    Other_sequence (32)
    Associated_feature: WBsf649221
      WBsf983849
      WBsf983850
      WBsf1009909
      WBsf219546
      WBsf219547
      WBsf219548
  Experimental_info: RNAi_result: WBRNAi00084404 Inferred_automatically: RNAi_primary
      WBRNAi00024105 Inferred_automatically: RNAi_primary
      WBRNAi00023307 Inferred_automatically: RNAi_primary
      WBRNAi00004184 Inferred_automatically: RNAi_primary
      WBRNAi00084382 Inferred_automatically: RNAi_primary
      WBRNAi00023583 Inferred_automatically: RNAi_primary
      WBRNAi00052937 Inferred_automatically: RNAi_primary
      WBRNAi00117093 Inferred_automatically: RNAi_primary
      WBRNAi00023817 Inferred_automatically: RNAi_primary
      WBRNAi00033469 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram880
      Chronogram1492
      Expr6648
      Expr6649
      Expr1015137
      Expr1038883
      Expr1156538
      Expr2006034
      Expr2024249
    Drives_construct: WBCnstr00002292
      WBCnstr00004293
      WBCnstr00025177
    Construct_product: WBCnstr00025177
    Microarray_results (17)
    Expression_cluster (199)
    Interaction (116)
  Map_info: Positive: Positive_clone: T09B4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 0.850703
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064339
    WBPaper00065140
  Method: Gene