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WormBase Tree Display for Gene: WBGene00020297

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Name Class

WBGene00020297SMapS_parentSequenceT07A9
IdentityVersion3
NameCGC_namenog-1Paper_evidenceWBPaper00044873
Sequence_nameT07A9.9
Molecular_nameT07A9.9
T07A9.9.1
CE17218
T07A9.9.2
T07A9.9.3
Other_namephi-58Person_evidenceWBPerson2582
CELE_T07A9.9Accession_evidenceNDBBX284604
Public_namenog-1
DB_infoDatabaseAceViewgene4B149
WormQTLgeneWBGene00020297
WormFluxgeneWBGene00020297
NDBlocus_tagCELE_T07A9.9
PanthergeneCAEEL|WormBase=WBGene00020297|UniProtKB=O44411
familyPTHR45759
NCBIgene176863
RefSeqproteinNM_171242.6
SwissProtUniProtAccO44411
UniProt_GCRPUniProtAccO44411
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
217 Mar 2005 13:54:35WBPerson2970Name_changeOther_namephi-58
328 Jan 2015 11:26:55WBPerson2970Name_changeCGC_namenog-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnog
Allele (50)
StrainWBStrain00051201
RNASeq_FPKM (74)
GO_annotation (17)
Contained_in_operonCEOP4020
Ortholog (44)
ParalogWBGene00010805Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012126Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015346Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016145Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionT07A9.9 encodes a GTPase with similarity to the mammalian CRFG proteins and Saccharomyces cerevisiae nucleolar NOG1 involved in biogenesis of the 60S ribosomal subunit; in C. elegans, T07A9.9 plays a role in regulating growth, development, lifespan, and fat metabolism; T07A9.9::GFP reporter fusions expressed ubiquitously throughout the life cycle and localizes to the nucleus; in intestinal cells, a T07A9.9 reporter fusion localizes to the nucleolus.Paper_evidenceWBPaper00044873
Curator_confirmedWBPerson1843
Date_last_updated22 Jan 2015 00:00:00
Automated_descriptionPredicted to enable GTPase activity and RNA binding activity. Involved in several processes, including determination of adult lifespan; negative regulation of lipid storage; and regulation of reproductive process. Located in nucleolus. Expressed in several structures, including excretory cell; germ cell; intestine; pharynx; and vulva. Is an ortholog of human GTPBP4 (GTP binding protein 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST07A9.9
Corresponding_CDS_historyT07A9.9b:wp261
T07A9.9c:wp239
T07A9.9c:wp261
Corresponding_transcriptT07A9.9.1
T07A9.9.2
T07A9.9.3
Other_sequence (82)
Associated_featureWBsf645755
WBsf659874
WBsf659875
WBsf995139
WBsf1016545
WBsf227838
WBsf227839
Experimental_infoRNAi_result (26)
Expr_patternExpr12046
Expr12047
Expr12048
Expr1029145
Expr1038842
Expr1156319
Expr2014347
Expr2032588
Drives_constructWBCnstr00020132
WBCnstr00020133
WBCnstr00025236
Construct_productWBCnstr00020133
WBCnstr00020280
WBCnstr00025236
Microarray_results (45)
Expression_cluster (151)
InteractionWBInteraction000035012
WBInteraction000035227
WBInteraction000035959
WBInteraction000036977
WBInteraction000037621
WBInteraction000037691
WBInteraction000037815
WBInteraction000037856
WBInteraction000038130
WBInteraction000038882
WBInteraction000040128
WBInteraction000040372
WBInteraction000041355
WBInteraction000041891
WBInteraction000042196
WBInteraction000043303
WBInteraction000043870
WBInteraction000043878
WBInteraction000044184
WBInteraction000044339
WBInteraction000044953
WBInteraction000044965
WBInteraction000044967
WBInteraction000044973
WBInteraction000044975
WBInteraction000044977
WBInteraction000045036
WBInteraction000045049
WBInteraction000045057
WBInteraction000046591
WBInteraction000046605
WBInteraction000046644
WBInteraction000046666
WBInteraction000047503
WBInteraction000105898
WBInteraction000106092
WBInteraction000106154
WBInteraction000106452
WBInteraction000107080
WBInteraction000108797
WBInteraction000109108
WBInteraction000109409
WBInteraction000109577
WBInteraction000110230
WBInteraction000110242
WBInteraction000111403
WBInteraction000112990
WBInteraction000115282
WBInteraction000116295
WBInteraction000117476
WBInteraction000117715
WBInteraction000117846
WBInteraction000118542
WBInteraction000118743
WBInteraction000119826
WBInteraction000119949
WBInteraction000120595
WBInteraction000121058
WBInteraction000121179
WBInteraction000121315
WBInteraction000121636
WBInteraction000121777
WBInteraction000124814
WBInteraction000124889
WBInteraction000127160
WBInteraction000127230
WBInteraction000127593
WBInteraction000137959
WBInteraction000141437
WBInteraction000141933
WBInteraction000143531
WBInteraction000145768
WBInteraction000146618
WBInteraction000147601
WBInteraction000151667
WBInteraction000152206
WBInteraction000160175
WBInteraction000163409
WBInteraction000163715
WBInteraction000164981
WBInteraction000164984
WBInteraction000168817
WBInteraction000170839
WBInteraction000170900
WBInteraction000171617
WBInteraction000172462
WBInteraction000172759
WBInteraction000179381
WBInteraction000180925
WBInteraction000181949
WBInteraction000182266
WBInteraction000184263
WBInteraction000187478
WBInteraction000190292
WBInteraction000190525
WBInteraction000196177
WBInteraction000197892
WBInteraction000198225
WBInteraction000199490
WBInteraction000199553
WBInteraction000202485
WBInteraction000202758
WBInteraction000206897
WBInteraction000206986
WBInteraction000207331
WBInteraction000213820
WBInteraction000220106
WBInteraction000221120
WBInteraction000222079
WBInteraction000222162
WBInteraction000222712
WBInteraction000223292
WBInteraction000223335
WBInteraction000226164
WBInteraction000226951
WBInteraction000227330
WBInteraction000228233
WBInteraction000230385
WBInteraction000231926
WBInteraction000232668
WBInteraction000232829
WBInteraction000239787
WBInteraction000239879
WBInteraction000241194
WBInteraction000243642
WBInteraction000243653
WBInteraction000243683
WBInteraction000243710
WBInteraction000243729
WBInteraction000243735
WBInteraction000243740
WBInteraction000243748
WBInteraction000244041
WBInteraction000244071
WBInteraction000244082
WBInteraction000244083
WBInteraction000246841
WBInteraction000249274
WBInteraction000251256
WBInteraction000253686
WBInteraction000254175
WBInteraction000254371
WBInteraction000255803
WBInteraction000261978
WBInteraction000262465
WBInteraction000270892
WBInteraction000271157
WBInteraction000272810
WBInteraction000272814
WBInteraction000277420
WBInteraction000278980
WBInteraction000279571
WBInteraction000282123
WBInteraction000290025
WBInteraction000300977
WBInteraction000306549
WBInteraction000310008
WBInteraction000310660
WBInteraction000313002
WBInteraction000313288
WBInteraction000314636
WBInteraction000319323
WBInteraction000319826
WBInteraction000319990
WBInteraction000320869
WBInteraction000328892
WBInteraction000330558
WBInteraction000331368
WBInteraction000332298
WBInteraction000334936
WBInteraction000335336
WBInteraction000336190
WBInteraction000342639
WBInteraction000354378
WBInteraction000357829
WBInteraction000361047
WBInteraction000366737
WBInteraction000367452
WBInteraction000367655
WBInteraction000373981
WBInteraction000376648
WBInteraction000377549
WBInteraction000378495
WBInteraction000389637
WBInteraction000389785
WBInteraction000392695
WBInteraction000399004
WBInteraction000403276
WBInteraction000404043
WBInteraction000408777
WBInteraction000413680
WBInteraction000417706
WBInteraction000418094
WBInteraction000420347
WBInteraction000420518
WBInteraction000422570
WBInteraction000424195
WBInteraction000441865
WBInteraction000447230
WBInteraction000451576
WBInteraction000452161
WBInteraction000462654
WBInteraction000462733
WBInteraction000463426
WBInteraction000464184
WBInteraction000464562
WBInteraction000466602
WBInteraction000469039
WBInteraction000470001
WBInteraction000470534
WBInteraction000470559
WBInteraction000471590
WBInteraction000473243
WBInteraction000505119
WBInteraction000525123
WBInteraction000525125
WBInteraction000525126
WBInteraction000525127
WBInteraction000543672
WBInteraction000543895
WBInteraction000550307
WBInteraction000552275
WBInteraction000552578
WBInteraction000553417
WBInteraction000553589
WBInteraction000553688
WBInteraction000558743
WBInteraction000570599
WBInteraction000570908
WBProcessWBbiopr:00000001
WBbiopr:00000121
Map_infoMapIVPosition-26.208
PositivePositive_cloneT07A9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028451
WBPaper00038491
WBPaper00044873
WBPaper00049828
WBPaper00055090
WBPaper00057242
WBPaper00065861
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene