Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00020220

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00020220SMapS_parentSequenceT05A7
IdentityVersion2
NameCGC_nameclec-140Person_evidenceWBPerson2531
Sequence_nameT05A7.2
Molecular_nameT05A7.2
T05A7.2.1
CE02858
Other_nameCELE_T05A7.2Accession_evidenceNDBBX284602
Public_nameclec-140
DB_infoDatabaseAceViewgene2E965
WormQTLgeneWBGene00020220
WormFluxgeneWBGene00020220
NDBlocus_tagCELE_T05A7.2
NCBIgene188082
RefSeqproteinNM_062425.3
TREEFAMTREEFAM_IDTF351663
TrEMBLUniProtAccQ22205
UniProt_GCRPUniProtAccQ22205
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
209 Oct 2007 15:40:27WBPerson2970Name_changeCGC_nameclec-140
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (63)
RNASeq_FPKM (74)
Ortholog (19)
Paralog (51)
Structured_descriptionAutomated_descriptionEnriched in cephalic sheath cell; intestine; and neurons based on tiling array and microarray studies. Is affected by several genes including eat-2; sir-2.1; and pmk-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including stavudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST05A7.2
Corresponding_transcriptT05A7.2.1
Other_sequencePT02385
Associated_featureWBsf221150
WBsf221151
Experimental_infoRNAi_result (11)
Expr_patternExpr1024613
Expr1038800
Expr1156068
Expr2010069
Expr2028311
Drives_constructWBCnstr00025288
Construct_productWBCnstr00025288
Microarray_results (57)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00037950:CEP-sheath-cells_adult_enriched
WBPaper00037950:CEP-sheath-cells_adult_SelectivelyEnriched
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00044736:oscillating_dev_expression
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050504:hrp-2(RNAi)_upregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051137:Orsay-virus_upregulated_rde-1(ne219)
WBPaper00053020:OrsayVirus-infection_upregulated_microarray
WBPaper00053302:stavudine_24h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053402:his-3(RNAi)_upregulated
WBPaper00053888:drh-3(rrr2)_downregulated
WBPaper00053909:N2_vs_CB4856_downregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055137:S.maltophilia_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056284:ints-4(RNAi)_upregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059754:C.neoformans_H99_upregulated
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061527:srj-42-srw-113
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065086:JU1400_N.parisii_regulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00065995:M.humicola-extract_downregulated_old-1(ok1273)
WBPaper00066232:ash-2(RNAi)_upregulated_WT
cgc4386_cluster_6_2
cgc4489_group_19
cgc4489_group_25
WBPaper00025032:cluster_2
WBPaper00025032:cluster_117
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00029437:dcr-1_upregulated
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00035227:heat_shock_regulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00035873:osm-11_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_F
WBPaper00038304:octr-1_regulated
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_old
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040963:TA200_down
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HF_11d_2.0mM_Down
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041960:daf-16_fasting_upregulated
WBPaper00041960:jun-1_fasting_upregulated
WBPaper00041960:kgb-1_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated_9hto12h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042258:DA1877_downregulated_GravidAdult
WBPaper00042574:JU1580_OrsayVirus_upregulated
WBPaper00042574:rde-1(ne219)_OrsayVirus_upregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00046083:pmk-1(km25)_OP50_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00050767:Octopamine_induced
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:cluster_2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(23_min)
[cgc5767]:expression_class_E_pi(122_min)
[cgc5767]:expression_class_E_pi(143_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(122_min)
[cgc5767]:expression_class_SE_pi(143_min)
[cgc6390]:Cluster_A
InteractionWBInteraction000207267
Map_infoMapIIPosition-3.66383Error0.007014
PositivePositive_cloneT05A7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene