WormBase Tree Display for Gene: WBGene00020139

WBGene00020139 SMap: S_parent: Sequence: T01B11
  Identity: Version: 2
    Name: CGC_name: eppl-1 Person_evidence: WBPerson139
      Sequence_name: T01B11.2
      Molecular_name: T01B11.2a
        T01B11.2a.1
        CE12894
        T01B11.2b
      Other_name: CELE_T01B11.2 Accession_evidence: NDB BX284604
      Public_name: eppl-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 31 May 2017 14:23:55 WBPerson2970 Name_change: CGC_name: eppl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: eppl
    Allele (24)
    Strain: WBStrain00051194
    RNASeq_FPKM (74)
    GO_annotation: 00050915
      00124841
      00124842
    Ortholog: WBGene00037892 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00069217 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00149585 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00146762 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125319 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g11031 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1138 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14233 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10881 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7584 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g9038 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g2256 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g14222 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g7979 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2950 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00198.g6785 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g15303 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold445.g1249 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00017.g1090 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_21590 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_015367 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09013 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16450 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40066500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11081 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00278764 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00267551 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00289103 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0036381 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1133 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-051127-33 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:14404 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:28249 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1919010 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1920197 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1590098 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2293818 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00001794 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015814 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020382 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lyase activity; pyridoxal phosphate binding activity; and transaminase activity. Expressed in PQR; amphid neurons; and hypodermis. Is an ortholog of human ETNPPL (ethanolamine-phosphate phospho-lyase) and PHYKPL (5-phosphohydroxy-L-lysine phospho-lyase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T01B11.2a
    Corresponding_CDS_history: T01B11.2b:wp242
    Corresponding_transcript: T01B11.2b
      T01B11.2a.1
    Other_sequence (113)
    Associated_feature: WBsf655491
      WBsf718139
      WBsf718140
      WBsf230429
      WBsf230430
  Experimental_info: RNAi_result: WBRNAi00017929 Inferred_automatically: RNAi_primary
      WBRNAi00034994 Inferred_automatically: RNAi_primary
      WBRNAi00115921 Inferred_automatically: RNAi_primary
      WBRNAi00026137 Inferred_automatically: RNAi_primary
      WBRNAi00052071 Inferred_automatically: RNAi_primary
      WBRNAi00026138 Inferred_automatically: RNAi_primary
      WBRNAi00027447 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14458
      Expr1010254
      Expr1038758
      Expr1155702
      Expr2005690
      Expr2023906
    Drives_construct: WBCnstr00025349
      WBCnstr00040887
    Construct_product: WBCnstr00016528
      WBCnstr00017062
      WBCnstr00017363
      WBCnstr00025349
    Microarray_results (30)
    Expression_cluster (236)
    Interaction (34)
  Map_info: Map: IV Position: 3.80775
    Positive: Positive_clone: T01B11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00053550
    WBPaper00055090
    WBPaper00063976
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene