WormBase Tree Display for Gene: WBGene00020094
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| WBGene00020094 | SMap | S_parent | Sequence | R144 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | wip-1 | Person_evidence | WBPerson1949 | |||||
| Sequence_name | R144.4 | ||||||||
| Molecular_name | R144.4a | ||||||||
| R144.4a.1 | |||||||||
| CE34587 | |||||||||
| R144.4b | |||||||||
| CE34588 | |||||||||
| R144.4b.1 | |||||||||
| Other_name | CELE_R144.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | wip-1 | ||||||||
| DB_info | Database | AceView | gene | 3G109 | |||||
| WormQTL | gene | WBGene00020094 | |||||||
| WormFlux | gene | WBGene00020094 | |||||||
| NDB | locus_tag | CELE_R144.4 | |||||||
| NCBI | gene | 175681 | |||||||
| RefSeq | protein | NM_171863.4 | |||||||
| NM_171109.4 | |||||||||
| TrEMBL | UniProtAcc | Q8WT46 | |||||||
| H2KZ22 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8WT46 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Mar 2006 08:13:40 | WBPerson2970 | Name_change | CGC_name | wip-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | wip | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00037056 | ||||||||
| WBStrain00034756 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022028 | ||||||||
| 00022029 | |||||||||
| 00022030 | |||||||||
| 00022031 | |||||||||
| 00124805 | |||||||||
| Contained_in_operon | CEOP3256 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00006957 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00007840 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015100 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015107 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011978 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | wip-1 encodes the C. elegans ortholog of WASP-interacting protein; wip-1 is required for embryonic morphogenesis, specifically ventral enclosure; WIP-1 is predicted to bind G-actin and in a yeast two-hybrid assay WIP-1 physically interacts with WSP-1, the C. elegans WASP ortholog; WIP-1 and WSP-1 are mutually required for normal protein levels; WIP-1 is broadly expressed in the embryo and is found in migrating hypodermal cells during ventral enclosure. | Paper_evidence | WBPaper00027006 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 29 May 2013 00:00:00 | ||||||||
| Automated_description | Enables cytoskeletal regulatory protein binding activity. Involved in embryonic body morphogenesis; regulation of cell migration; and regulation of protein stability. Expressed in hypodermis. Is an ortholog of human WIPF1 (WAS/WASL interacting protein family member 1); WIPF2 (WAS/WASL interacting protein family member 2); and WIPF3 (WAS/WASL interacting protein family member 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R144.4a | |||||||
| R144.4b | |||||||||
| Corresponding_CDS_history | R144.4a:wp102 | ||||||||
| R144.4b:wp102 | |||||||||
| Corresponding_transcript | R144.4a.1 | ||||||||
| R144.4b.1 | |||||||||
| Other_sequence | AS00801 | ||||||||
| CRC00425_1 | |||||||||
| NB08701 | |||||||||
| CBC02684_1 | |||||||||
| NBC07295_1 | |||||||||
| Tcol_contig19598 | |||||||||
| JO475789.1 | |||||||||
| ASC23400_1 | |||||||||
| Associated_feature | WBsf981465 | ||||||||
| WBsf992270 | |||||||||
| WBsf992271 | |||||||||
| WBsf1014827 | |||||||||
| WBsf1014828 | |||||||||
| WBsf224836 | |||||||||
| WBsf224837 | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Expr4343 | ||||||||
| Expr1019444 | |||||||||
| Expr1038733 | |||||||||
| Expr1155604 | |||||||||
| Expr1200206 | |||||||||
| Expr2018069 | |||||||||
| Expr2036207 | |||||||||
| Drives_construct | WBCnstr00025376 | ||||||||
| Construct_product | WBCnstr00025376 | ||||||||
| Antibody | WBAntibody00001047 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction (63) | |||||||||
| Map_info | Map | III | Position | -2.22895 | Error | 0.003422 | |||
| Positive | Positive_clone | R144 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027006 | ||||||||
| WBPaper00031805 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040857 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056797 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
