WormBase Tree Display for Gene: WBGene00020047
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WBGene00020047 | SMap | S_parent | Sequence | R13A5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | ttr | |||||
Allele (19) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00089797 | |||||
00124767 | ||||||
Ortholog (27) | ||||||
Paralog (62) | ||||||
Structured_description | Concise_description | R13A5.3 encodes a protein containing a predicted signal sequence followed by a transthyretin-like domain; although the product of R13A5.3 belongs to a family of apparently nematode-specific proteins whose function is not yet known, loss of R13A5.3 activity via RNAi has been reported to result in hyperactive locomotion. | Paper_evidence | WBPaper00002969 | ||
WBPaper00005487 | ||||||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 04 Sep 2007 00:00:00 | |||||
Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R13A5.3 | ||||
Corresponding_transcript | R13A5.3.1 | |||||
R13A5.3.2 | ||||||
Other_sequence (17) | ||||||
Associated_feature | WBsf645347 | |||||
WBsf225266 | ||||||
Experimental_info | RNAi_result | WBRNAi00062788 | Inferred_automatically | RNAi_primary | ||
WBRNAi00005677 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00034916 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00017818 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00051889 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1017122 | |||||
Expr1155546 | ||||||
Expr2017598 | ||||||
Expr2035737 | ||||||
Drives_construct | WBCnstr00025404 | |||||
Construct_product | WBCnstr00025404 | |||||
Microarray_results (19) | ||||||
Expression_cluster (190) | ||||||
Interaction (118) | ||||||
Map_info (3) | ||||||
Reference | WBPaper00002969 | |||||
WBPaper00005487 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |