WormBase Tree Display for Gene: WBGene00020047

WBGene00020047 SMap: S_parent: Sequence: R13A5
  Identity: Version: 2
    Name: CGC_name: ttr-32
      Sequence_name: R13A5.3
      Molecular_name: R13A5.3
        R13A5.3.1
        CE01375
        R13A5.3.2
      Other_name: CELE_R13A5.3 Accession_evidence: NDB BX284603
      Public_name: ttr-32
    DB_info: Database: AceView gene 3I655
        WormQTL gene WBGene00020047
        WormFlux gene WBGene00020047
        NDB locus_tag CELE_R13A5.3
        Panther gene CAEEL|WormBase=WBGene00020047|UniProtKB=Q95Y92
          family PTHR21700
        NCBI gene 187854
        RefSeq protein NM_066257.2
        TREEFAM TREEFAM_ID TF315773
        TrEMBL UniProtAcc Q95Y92
        UniProt_GCRP UniProtAcc Q95Y92
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Sep 2007 11:48:01 WBPerson2970 Name_change: CGC_name: ttr-32
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttr
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00089797
      00124767
    Ortholog (27)
    Paralog (62)
    Structured_description: Concise_description: R13A5.3 encodes a protein containing a predicted signal sequence followed by a transthyretin-like domain; although the product of R13A5.3 belongs to a family of apparently nematode-specific proteins whose function is not yet known, loss of R13A5.3 activity via RNAi has been reported to result in hyperactive locomotion. Paper_evidence: WBPaper00002969
            WBPaper00005487
          Curator_confirmed: WBPerson1843
          Date_last_updated: 04 Sep 2007 00:00:00
      Automated_description: Predicted to be located in cell surface and extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R13A5.3
    Corresponding_transcript: R13A5.3.1
      R13A5.3.2
    Other_sequence (17)
    Associated_feature: WBsf645347
      WBsf225266
  Experimental_info: RNAi_result: WBRNAi00062788 Inferred_automatically: RNAi_primary
      WBRNAi00005677 Inferred_automatically: RNAi_primary
      WBRNAi00034916 Inferred_automatically: RNAi_primary
      WBRNAi00017818 Inferred_automatically: RNAi_primary
      WBRNAi00051889 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017122
      Expr1155546
      Expr2017598
      Expr2035737
    Drives_construct: WBCnstr00025404
    Construct_product: WBCnstr00025404
    Microarray_results (19)
    Expression_cluster (190)
    Interaction: WBInteraction000120816
      WBInteraction000122401
      WBInteraction000135463
      WBInteraction000138758
      WBInteraction000144362
      WBInteraction000146387
      WBInteraction000147089
      WBInteraction000148943
      WBInteraction000151364
      WBInteraction000157250
      WBInteraction000161724
      WBInteraction000162727
      WBInteraction000162750
      WBInteraction000172705
      WBInteraction000176841
      WBInteraction000181672
      WBInteraction000184632
      WBInteraction000193548
      WBInteraction000194573
      WBInteraction000195082
      WBInteraction000195856
      WBInteraction000198435
      WBInteraction000199339
      WBInteraction000199891
      WBInteraction000202732
      WBInteraction000203314
      WBInteraction000209473
      WBInteraction000212830
      WBInteraction000212925
      WBInteraction000215451
      WBInteraction000221819
      WBInteraction000222431
      WBInteraction000223004
      WBInteraction000223543
      WBInteraction000223937
      WBInteraction000231420
      WBInteraction000231453
      WBInteraction000235584
      WBInteraction000235857
      WBInteraction000236928
      WBInteraction000238469
      WBInteraction000242255
      WBInteraction000248609
      WBInteraction000249648
      WBInteraction000250366
      WBInteraction000250449
      WBInteraction000252174
      WBInteraction000252691
      WBInteraction000252786
      WBInteraction000256975
      WBInteraction000257443
      WBInteraction000260548
      WBInteraction000261211
      WBInteraction000264945
      WBInteraction000266723
      WBInteraction000267763
      WBInteraction000269313
      WBInteraction000273147
      WBInteraction000273582
      WBInteraction000276163
      WBInteraction000279907
      WBInteraction000283137
      WBInteraction000293967
      WBInteraction000301718
      WBInteraction000314068
      WBInteraction000314445
      WBInteraction000315071
      WBInteraction000315570
      WBInteraction000319492
      WBInteraction000322410
      WBInteraction000322954
      WBInteraction000325521
      WBInteraction000327390
      WBInteraction000332928
      WBInteraction000332943
      WBInteraction000333246
      WBInteraction000334283
      WBInteraction000343795
      WBInteraction000348677
      WBInteraction000350335
      WBInteraction000357545
      WBInteraction000359758
      WBInteraction000362545
      WBInteraction000363804
      WBInteraction000364459
      WBInteraction000368593
      WBInteraction000369740
      WBInteraction000370324
      WBInteraction000370524
      WBInteraction000371867
      WBInteraction000375468
      WBInteraction000375563
      WBInteraction000378696
      WBInteraction000382087
      WBInteraction000382968
      WBInteraction000386252
      WBInteraction000392989
      WBInteraction000393096
      WBInteraction000399268
      WBInteraction000401621
      WBInteraction000406160
      WBInteraction000406376
      WBInteraction000411975
      WBInteraction000420373
      WBInteraction000422050
      WBInteraction000423115
      WBInteraction000428141
      WBInteraction000431708
      WBInteraction000433091
      WBInteraction000439578
      WBInteraction000442900
      WBInteraction000443778
      WBInteraction000443797
      WBInteraction000447040
      WBInteraction000449226
      WBInteraction000455379
      WBInteraction000461200
      WBInteraction000461482
  Map_info: Map: III Position: -0.666614 Error: 0.000371
    Positive: Positive_clone: R13A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00002969
    WBPaper00005487
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene