WormBase Tree Display for Gene: WBGene00020025
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| WBGene00020025 | SMap | S_parent | Sequence | R12C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R12C12.5 | |||||||
| Molecular_name | R12C12.5 | ||||||||
| R12C12.5.1 | |||||||||
| CE29820 | |||||||||
| Other_name | CELE_R12C12.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | R12C12.5 | ||||||||
| DB_info | Database | AceView | gene | 2G334 | |||||
| WormQTL | gene | WBGene00020025 | |||||||
| WormFlux | gene | WBGene00020025 | |||||||
| NDB | locus_tag | CELE_R12C12.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020025|UniProtKB=Q21959 | |||||||
| family | PTHR22761 | ||||||||
| NCBI | gene | 174010 | |||||||
| RefSeq | protein | NM_062805.8 | |||||||
| TREEFAM | TREEFAM_ID | TF314269 | |||||||
| TrEMBL | UniProtAcc | Q21959 | |||||||
| UniProt_GCRP | UniProtAcc | Q21959 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (20) | |||||||||
| Strain | WBStrain00055204 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073500 | ||||||||
| 00073501 | |||||||||
| 00073502 | |||||||||
| 00073503 | |||||||||
| 00073504 | |||||||||
| 00124754 | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00011976 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016497 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00016961 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018290 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022027 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway and vesicle budding from membrane. Predicted to be located in cytoplasmic side of plasma membrane and multivesicular body. Predicted to be part of ESCRT III complex. Expressed in germ line. Is an ortholog of human CHMP4A (charged multivesicular body protein 4A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R12C12.5 | |||||||
| Corresponding_transcript | R12C12.5.1 | ||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf650107 | ||||||||
| WBsf665584 | |||||||||
| WBsf223124 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00061868 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034884 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051839 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017793 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4090 | ||||||||
| Expr1025403 | |||||||||
| Expr1038699 | |||||||||
| Expr1155500 | |||||||||
| Expr2005610 | |||||||||
| Expr2023827 | |||||||||
| Drives_construct | WBCnstr00025423 | ||||||||
| Construct_product | WBCnstr00025423 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (148) | |||||||||
| Interaction (40) | |||||||||
| Map_info | Positive | Positive_clone | R12C12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.602913 | |||||||
| Method | Gene |
