WormBase Tree Display for Gene: WBGene00019855

WBGene00019855 SMap: S_parent: Sequence: R03H10
  Identity: Version: 1
    Name: Sequence_name: R03H10.2
      Molecular_name: R03H10.2
        R03H10.2.1
        CE25965
      Other_name: CELE_R03H10.2 Accession_evidence: NDB BX284602
      Public_name: R03H10.2
    DB_info: Database: AceView gene 2E457
        WormQTL gene WBGene00019855
        WormFlux gene WBGene00019855
        NDB locus_tag CELE_R03H10.2
        NCBI gene 173751
        RefSeq protein NM_062327.6
        TREEFAM TREEFAM_ID TF343332
        TrEMBL UniProtAcc Q9GYM4
        UniProt_GCRP UniProtAcc Q9GYM4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499702
      WBVar00103486
      WBVar01404856
      WBVar00103487
      WBVar01404857
      WBVar00103488
      WBVar00103489
      WBVar01404858
      WBVar01655333
      WBVar00170947
      WBVar00170948
      WBVar01247106
      WBVar00170949
      WBVar01370167
      WBVar00170950
      WBVar01370178
      WBVar00170951
      WBVar00170952
      WBVar01370189
      WBVar00723954
      WBVar01370200
      WBVar00170953
      WBVar00723955
      WBVar01370211
      WBVar00170954
      WBVar00170955
      WBVar00723956
      WBVar01370222
      WBVar00170956
      WBVar00723957
      WBVar00258563
      WBVar01247117
      WBVar01370233
      WBVar00170957
      WBVar00723958
      WBVar00723959
      WBVar00170958
      WBVar00170959
      WBVar00723960
      WBVar01902547
      WBVar00723961
      WBVar00363361
      WBVar00170960
      WBVar00170961
      WBVar00723962
      WBVar00363362
      WBVar00170962
      WBVar00363363
      WBVar00723963
      WBVar00170963
      WBVar01498435
      WBVar00363364
      WBVar00723964
      WBVar00363365
      WBVar00170964
      WBVar00723965
      WBVar00363366
      WBVar00170965
      WBVar00723966
      WBVar00723967
      WBVar01370292
      WBVar02029147
      WBVar01626387
      WBVar00170966
      WBVar00363367
      WBVar00723968
      WBVar01626388
      WBVar00170967
      WBVar01370293
      WBVar00363368
      WBVar01626389
      WBVar00170968
      WBVar00723969
      WBVar00363369
      WBVar00363370
      WBVar00170969
      WBVar00723970
      WBVar01603693
      WBVar00363371
      WBVar01370314
      WBVar00723971
      WBVar00170970
      WBVar00363372
      WBVar00170971
      WBVar00723972
      WBVar01370323
      WBVar00723973
      WBVar00363373
      WBVar00170972
      WBVar00170973
      WBVar00363374
      WBVar01370324
      WBVar00723974
      WBVar00170974
      WBVar01370328
      WBVar00723975
      WBVar00363375
      WBVar00723976
      WBVar00170975
      WBVar00363376
      WBVar00723977
      WBVar00363377
      WBVar00170976
      WBVar00723978
      WBVar00170977
      WBVar00363378
      WBVar00363379
      WBVar00723979
      WBVar00170978
      WBVar00723980
      WBVar00363380
      WBVar00170979
      WBVar02046717
      WBVar00723981
      WBVar00363381
      WBVar00170980
      WBVar00723982
      WBVar00170981
      WBVar00363382
      WBVar00170982
      WBVar01948929
      WBVar00723983
      WBVar00363383
      WBVar00363384
      WBVar00723984
      WBVar00170983
      WBVar00723985
      WBVar00363385
      WBVar00170984
      WBVar00363386
      WBVar00170985
      WBVar00723986
      WBVar00723987
      WBVar00170986
      WBVar00363387
      WBVar00363388
      WBVar01989064
      WBVar00170987
      WBVar00723988
      WBVar00170988
      WBVar00723989
      WBVar00363389
      WBVar01989065
      WBVar00363390
      WBVar01989066
      WBVar00723990
      WBVar00170990
      WBVar00723991
      WBVar00170991
      WBVar00723992
      WBVar01305081
      WBVar00723993
      WBVar01305083
      WBVar00723994
      WBVar01305085
      WBVar00723995
      WBVar01305087
      WBVar00723996
      WBVar01305089
      WBVar01305091
      WBVar00723997
      WBVar00723998
      WBVar00723999
      WBVar02089189
      WBVar00724000
      WBVar00724001
      WBVar00724002
      WBVar00724003
      WBVar02106489
      WBVar01559266
      WBVar00724004
      WBVar00724005
      WBVar00724006
      WBVar00237871
      WBVar00724007
      WBVar00724008
      WBVar01766224
      WBVar00724009
      WBVar00724010
      WBVar01766225
      WBVar01766226
      WBVar00724011
      WBVar00724012
      WBVar01766227
      WBVar01766228
      WBVar02035809
      WBVar00724013
      WBVar02035810
      WBVar01766229
      WBVar00724014
      WBVar00724015
      WBVar00724016
      WBVar00724017
      WBVar00724018
      WBVar00724019
      WBVar01959845
      WBVar00724020
      WBVar01959848
      WBVar00724021
      WBVar00724022
      WBVar01959850
      WBVar00724023
      WBVar01959851
      WBVar01959853
      WBVar00724024
      WBVar00724025
      WBVar01959854
      WBVar00724026
      WBVar00724027
      WBVar00724028
      WBVar00724029
      WBVar00724030
      WBVar00724031
      WBVar00259188
      WBVar00724032
      WBVar00724033
      WBVar00724034
      WBVar00724035
      WBVar00724036
      WBVar01641989
      WBVar00724037
      WBVar00724038
      WBVar00724039
      WBVar00724040
      WBVar00724041
      WBVar00724042
      WBVar02100088
      WBVar00724043
      WBVar00724044
      WBVar00724045
      WBVar00724046
      WBVar00724047
      WBVar00724048
      WBVar00724049
      WBVar00724050
      WBVar00724051
      WBVar00724052
      WBVar00724053
      WBVar00724054
      WBVar01489331
      WBVar01719481
      WBVar02129753
      WBVar01719482
      WBVar02129754
      WBVar01719483
      WBVar00549763
      WBVar00549768
      WBVar00549773
      WBVar00549778
      WBVar00549780
      WBVar00549781
      WBVar00549782
      WBVar00549787
      WBVar00549790
      WBVar00549795
      WBVar02151750
      WBVar01238741
      WBVar01238742
      WBVar01238743
      WBVar01238745
      WBVar01238747
      WBVar01576896
      WBVar01576897
      WBVar01238748
      WBVar01238750
      WBVar01576898
      WBVar01576899
      WBVar01576900
      WBVar01576901
      WBVar01576902
      WBVar01916540
      WBVar01393462
      WBVar01393463
      WBVar01705505
      WBVar00258526
      WBVar00263126
      WBVar02010012
      WBVar01437346
      WBVar02006931
      WBVar00258166
      WBVar00277042
      WBVar00277043
      WBVar01792027
      WBVar01792028
      WBVar01792029
      WBVar02108817
    RNASeq_FPKM (74)
    GO_annotation: 00092823
    Ortholog (28)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R03H10.2
    Corresponding_transcript: R03H10.2.1
    Other_sequence: Dviv_isotig24478
      CBC01778_1
      JI171302.1
      CRC04909_1
    Associated_feature: WBsf657448
      WBsf657449
      WBsf987525
      WBsf987526
      WBsf987527
      WBsf1012048
      WBsf221087
  Experimental_info: RNAi_result: WBRNAi00017369 Inferred_automatically: RNAi_primary
      WBRNAi00002083 Inferred_automatically: RNAi_primary
      WBRNAi00051197 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023323
      Expr1038610
      Expr1154904
      Expr2005354
      Expr2023574
    Drives_construct: WBCnstr00025543
    Construct_product: WBCnstr00025543
    Microarray_results (21)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00035197:fer-1_downregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00042561:smgl-1(RNAi)_downregulated
      WBPaper00043945:MeHg_upregulated
      WBPaper00044260:1-methylnicotinamide_downregulated
      WBPaper00044260:nicotic-acid_downregulated
      WBPaper00044426:rotenone_24h_downregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044760:somatic_specific
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045316:prg-1_upregulated_L1
      WBPaper00045316:prg-1_upregulated_L2
      WBPaper00045316:prg-1_upregulated_L3
      WBPaper00045417:128Q-huntingtin_downreglated
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00046121:ecdoderm_unique
      WBPaper00048611:MnCl2_upregulated
      WBPaper00048988:daf-2(e1370)_daf-16(mu86)_upregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_4
      WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050234:lin-28(RNAi)_upregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:hypodermis_enriched
      WBPaper00050990:hypodermis_expressed
      WBPaper00051245:cytoplasm_specific
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_specific
      WBPaper00051311:VGLN-1-interacting
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053664:ins-11(tm1053)_upregulated
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055626:pry-1(mu38)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00055971:nhl-2(ok818)_20C_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056165:MINA-1_interacting_mRNA
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056290:mdt-15(mg584)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
      WBPaper00057347:nhr-14(tm1473)_downreglated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058958:100mGy-irradiation-72h_upregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059567:olrn-1(ums9)_regulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
      WBPaper00059735:glucose_upregulated_N2
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060273:vrk-1(RNAi)_downregulated
      WBPaper00060445:ikb-1(nr2027)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
      WBPaper00060526:plp-1(ok2155)_downregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060703:nas-38(ok3407)_upregulated
      WBPaper00060764:swsn-1(os22ts)_downregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:ADEsh
      WBPaper00061340:AIB
      WBPaper00061340:Excretory_duct_and_pore
      WBPaper00061340:F_U
      WBPaper00061340:G2_and_W_blasts
      WBPaper00061340:Glia
      WBPaper00061340:hyp1V_and_ant_arc_V
      WBPaper00061340:hyp3
      WBPaper00061340:hyp4_hyp5_hyp6
      WBPaper00061340:Parents_of_PHsh_hyp8_hyp9
      WBPaper00061340:Parent_of_hyp3_ILsoDx
      WBPaper00061340:T
      WBPaper00061340:Y
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061479:hda-1(ne4748)_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:R07G3.8_9125-ric-4_17408
      WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062156:jmjd-1.2(zr1010)_upregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062440:crh-1(syb385)_downregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062497:xpf-1(tm2842)_upregulated
      WBPaper00062534:fat-P-80_downregulated
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062684:pathogen_upregulated_N2
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064769:him-17(me24)_downregulated
      WBPaper00064871:hypoxia_downregulated_F2
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065029:cadmium_upregulated
      WBPaper00065158:25C_vs_15C_upregulated_WholeAnimal
      WBPaper00065225:nhr-42(tm1375)_upregulated_uninfected
      WBPaper00065560:E.coli-HB101_downregulated_F3
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065835:Day11_vs_Day1_upregulated
      WBPaper00065841:35_2
      WBPaper00065841:35_3
      WBPaper00065841:79_0
      WBPaper00065841:79_2
      WBPaper00065841:82_1
      WBPaper00065984:pals-17(syb3980)_downregulated
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_upregulated_WT
      WBPaper00066232:hsf-1(RNAi)_downregulated_ash-2
      cgc4386_cluster_5_3
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00029437:dcr-1_upregulated
      WBPaper00030985:Erwinia_carotovora_downregulated
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00034739:N2lessDR1350
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00036286:Pattern_G
      WBPaper00038172:crh-1null_up_regulated
      WBPaper00039866:ClassComp_daf-19_upregulated
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00041002:HF_11d_0.2mM_Up
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00045673:colistin_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(122_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc6390]:male_sex-enriched
    Interaction: WBInteraction000227884
      WBInteraction000305497
      WBInteraction000306930
      WBInteraction000349724
      WBInteraction000367633
      WBInteraction000418852
      WBInteraction000503231
      WBInteraction000581125
  Map_info: Positive: Positive_clone: R03H10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -5.34024
  Reference: WBPaper00065331
  Method: Gene