WormBase Tree Display for Gene: WBGene00019847

WBGene00019847 SMap: S_parent: Sequence: R03G5
  Identity: Version: 2
    Name: Sequence_name: R03G5.6
      Molecular_name: R03G5.6
        R03G5.6.1
        CE45547
        R03G5.6.2
      Other_name: R03G5.c Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_R03G5.6 Accession_evidence: NDB BX284606
      Public_name: R03G5.6
    DB_info: Database: AceView gene XI426
        WormQTL gene WBGene00019847
        WormFlux gene WBGene00019847
        NDB locus_tag CELE_R03G5.6
        NCBI gene 187543
        RefSeq protein NM_001381027.3
        TrEMBL UniProtAcc Q8MQ01
        UniProt_GCRP UniProtAcc Q8MQ01
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 17 Nov 2010 09:33:19 WBPerson1849 Event: Acquires_merge: WBGene00019848
      Acquires_merge: WBGene00019848
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (202)
    RNASeq_FPKM (74)
    GO_annotation: 00084460
    Ortholog (21)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R03G5.6
    Corresponding_CDS_history: R03G5.6:wp221
      R03G5.6b:wp272
    Corresponding_transcript: R03G5.6.1
      R03G5.6.2
    Other_sequence: CJC14010_1
      DI00883
      CR10823
      AYC01266_1
    Associated_feature: WBsf669968
      WBsf1005958
      WBsf1005959
      WBsf1005960
      WBsf1005961
      WBsf1023313
      WBsf1023314
      WBsf1023315
      WBsf237616
  Experimental_info: RNAi_result: WBRNAi00093235 Inferred_automatically: RNAi_primary
      WBRNAi00051190 Inferred_automatically: RNAi_primary
      WBRNAi00001902 Inferred_automatically: RNAi_primary
      WBRNAi00034563 Inferred_automatically: RNAi_primary
      WBRNAi00051189 Inferred_automatically: RNAi_primary
      WBRNAi00093234 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1029004
      Expr1038608
      Expr1154897
      Expr2005350
      Expr2023570
    Drives_construct: WBCnstr00025548
      WBCnstr00025549
    Construct_product: WBCnstr00025548
      WBCnstr00025549
    Microarray_results (31)
    Expression_cluster: WBPaper00032976:dosage_compensated_genes
      WBPaper00033065:clk-1(qm30)_upregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:dopaminergic-neurons_larva_enriched
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045316:prg-1_upregulated_L2
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Oogenic
      WBPaper00045774:clk-1_upregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050015:ifg-1(RNAi)_upregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053321:PGCs_depleted_NuGen
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053599:female_vs_male_upregulated
      WBPaper00053599:oocyte_vs_mitosis_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00056161:hermaphrodite_enriched_siRNA
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00057136:yap-1(ys38)_downregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_enriched
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:ALA
      WBPaper00061340:Neuroblast_ADE_ADA
      WBPaper00061340:PLM_ALN_grandparent
      WBPaper00061340:PVR
      WBPaper00061340:Rectal_cell
      WBPaper00061527:daf-1_17383-epc-1_15051
      WBPaper00061527:ldb-1_2877-scd-1_3086
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062345:bortezomib_4h_upregulated_N2
      WBPaper00062520:qui-1(db104)_upregulated
      WBPaper00064315:mes-3(bn199)_upregulated_EGCs
      WBPaper00064315:mes-3(bn199)_upregulated_PGCs
      WBPaper00064315:mes-4(bn73)_upregulated_EGCs
      WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065835:Day5_vs_Day1_upregulated
      WBPaper00065835:Day11_vs_Day1_upregulated
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00029437:dcr-1_upregulated
      WBPaper00030839:Larval_A_Class
      WBPaper00030985:Serratia_marcesens_upregulated
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00034739:N2moreDR1350
      WBPaper00035084:L3_enriched_AIN-2_IP
      WBPaper00035227:heat_shock_regulated
      WBPaper00036286:Pattern_B
      WBPaper00036286:Pattern_F
      WBPaper00037113:Diazinon_16C_regulated
      WBPaper00037611:RNP-8-associated
      WBPaper00037695:LD_3-day
      WBPaper00037695:WC_5-day
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040876:mir-35_upregulated
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_prime
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
    Interaction (21)
  Map_info: Positive: Positive_clone: R03G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -1.16131
  Method: Gene