WormBase Tree Display for Gene: WBGene00019813
expand all nodes | collapse all nodes | view schema
| WBGene00019813 | SMap | S_parent | Sequence | R01H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ger-1 | Person_evidence | WBPerson2099 | |||||
| Sequence_name | R01H2.5 | ||||||||
| Molecular_name | R01H2.5 | ||||||||
| R01H2.5.1 | |||||||||
| CE00804 | |||||||||
| Other_name | CELE_R01H2.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ger-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Mar 2006 10:02:58 | WBPerson2970 | Name_change | CGC_name | ger-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ger | ||||||||
| Allele (35) | |||||||||
| Strain | WBStrain00035248 | ||||||||
| WBStrain00035249 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (38) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Concise_description | ger-1 encodes the C. elegans ortholog of GDP-keto-6-deoxymannose 3,5-epimerase/4-reductase; GER-1 is involved in the synthesis of GDP-fucose and exhibits enzymatic activity in vitro; ger-1 is expressed in larvae and adults. | Paper_evidence | WBPaper00027362 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 22 Dec 2009 00:00:00 | ||||||||
| Automated_description | Enables GDP-L-fucose synthase activity. Involved in GDP-L-fucose biosynthetic process. Expressed in pharynx; seam cell; and spermatheca. Is an ortholog of human GFUS (GDP-L-fucose synthase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R01H2.5 | |||||||
| Corresponding_transcript | R01H2.5.1 | ||||||||
| Other_sequence (81) | |||||||||
| Associated_feature | WBsf651162 | ||||||||
| WBsf667039 | |||||||||
| WBsf992935 | |||||||||
| WBsf226894 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00088633 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00096506 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096589 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017305 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096340 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034522 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005324 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088740 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096423 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051114 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram14 | ||||||||
| Chronogram1469 | |||||||||
| Expr4363 | |||||||||
| Expr7625 | |||||||||
| Expr1024686 | |||||||||
| Expr1038581 | |||||||||
| Expr1154819 | |||||||||
| Expr2012021 | |||||||||
| Expr2030257 | |||||||||
| Drives_construct | WBCnstr00001052 | ||||||||
| WBCnstr00001053 | |||||||||
| WBCnstr00012770 | |||||||||
| WBCnstr00025577 | |||||||||
| Construct_product | WBCnstr00025577 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction (31) | |||||||||
| Map_info | Map | III | Position | -0.802408 | Error | 0.00106 | |||
| Positive | Positive_clone | R01H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027362 | ||||||||
| WBPaper00027766 | |||||||||
| WBPaper00035585 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039133 | |||||||||
| WBPaper00043274 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
