WormBase Tree Display for Gene: WBGene00019504
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| WBGene00019504 | SMap | S_parent | Sequence | K07H8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K07H8.2 | |||||||
| Molecular_name | K07H8.2a | ||||||||
| K07H8.2a.1 | |||||||||
| CE18022 | |||||||||
| K07H8.2b | |||||||||
| CE28593 | |||||||||
| K07H8.2c | |||||||||
| CE37721 | |||||||||
| K07H8.2b.1 | |||||||||
| K07H8.2c.1 | |||||||||
| K07H8.2c.2 | |||||||||
| Other_name | CELE_K07H8.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | K07H8.2 | ||||||||
| DB_info | Database | AceView | gene | 4J57 | |||||
| WormQTL | gene | WBGene00019504 | |||||||
| WormFlux | gene | WBGene00019504 | |||||||
| NDB | locus_tag | CELE_K07H8.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019504|UniProtKB=O45182 | |||||||
| family | PTHR16228 | ||||||||
| NCBI | gene | 177623 | |||||||
| RefSeq | protein | NM_001383140.2 | |||||||
| NM_001392347.1 | |||||||||
| NM_068993.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF313647 | |||||||
| TrEMBL | UniProtAcc | Q965K0 | |||||||
| O45182 | |||||||||
| Q5W612 | |||||||||
| UniProt_GCRP | UniProtAcc | O45182 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (45) | |||||||||
| Strain | WBStrain00001550 | ||||||||
| WBStrain00032067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034001 | ||||||||
| 00034002 | |||||||||
| 00034003 | |||||||||
| 00034004 | |||||||||
| 00034005 | |||||||||
| 00124347 | |||||||||
| 00124348 | |||||||||
| Contained_in_operon | CEOP4280 | ||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00014201 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022682 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | K07H8.2 encodes, by alternative splicing, three isoforms of an ortholog of human SLC41A1 (OMIM:610801) and bacterial MgtE; like its orthologs, K07H8.2 is predicted to transport Mg(2+) into cells; K07H8.2 is paralogous to ZK185.2 and ZK1053.6; K07H8.2 is expressed in intestine, but has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00006525 | |||||
| WBPaper00031006 | |||||||||
| WBPaper00031199 | |||||||||
| WBPaper00031200 | |||||||||
| WBPaper00031201 | |||||||||
| WBPaper00031202 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 18 Nov 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable monoatomic cation transmembrane transporter activity. Predicted to be involved in monoatomic cation transmembrane transport. Predicted to be located in plasma membrane. Is an ortholog of human SLC41A1 (solute carrier family 41 member 1) and SLC41A2 (solute carrier family 41 member 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K07H8.2a | |||||||
| K07H8.2b | |||||||||
| K07H8.2c | |||||||||
| Corresponding_transcript | K07H8.2a.1 | ||||||||
| K07H8.2b.1 | |||||||||
| K07H8.2c.1 | |||||||||
| K07H8.2c.2 | |||||||||
| Other_sequence (33) | |||||||||
| Associated_feature | WBsf660392 | ||||||||
| WBsf660393 | |||||||||
| WBsf977188 | |||||||||
| WBsf977189 | |||||||||
| WBsf228652 | |||||||||
| WBsf228653 | |||||||||
| WBsf228654 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050202 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050204 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008229 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034094 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016758 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6353 | ||||||||
| Expr1027421 | |||||||||
| Expr1038428 | |||||||||
| Expr1153902 | |||||||||
| Expr2004878 | |||||||||
| Expr2023100 | |||||||||
| Drives_construct | WBCnstr00002392 | ||||||||
| WBCnstr00025792 | |||||||||
| Construct_product | WBCnstr00025792 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (124) | |||||||||
| SAGE_tag (17) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Positive | Positive_clone | K07H8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.70504 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
