WormBase Tree Display for Gene: WBGene00019301

WBGene00019301 SMap: S_parent: Sequence: K02D10
  Identity: Version: 1
    Name: Sequence_name: K02D10.1
      Molecular_name (11)
      Other_name: CELE_K02D10.1 Accession_evidence: NDB BX284603
      Public_name: K02D10.1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (79)
    RNASeq_FPKM (74)
    GO_annotation: 00005534
      00005535
      00042660
      00124190
    Contained_in_operon: CEOP3540
    Ortholog (34)
    Structured_description: Automated_description: Predicted to enable metal ion binding activity and phosphatase activity. Predicted to be located in mitochondrion. Is an ortholog of human NIPSNAP1 (nipsnap homolog 1) and NIPSNAP2 (nipsnap homolog 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K02D10.1a
      K02D10.1b
      K02D10.1c
    Corresponding_CDS_history: K02D10.1a:wp96
      K02D10.1a:wp146
    Corresponding_transcript: K02D10.1a.1
      K02D10.1b.1
      K02D10.1c.1
      K02D10.1c.2
      K02D10.1c.3
    Other_sequence (16)
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00005252 Inferred_automatically: RNAi_primary
      WBRNAi00016443 Inferred_automatically: RNAi_primary
      WBRNAi00001743 Inferred_automatically: RNAi_primary
      WBRNAi00080594 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr65
      Expr1017755
      Expr1038342
      Expr1153409
      Expr2004678
      Expr2022904
    Drives_construct: WBCnstr00025932
    Construct_product: WBCnstr00025932
    Microarray_results (38)
    Expression_cluster: WBPaper00028451:Low_abundance_spermatogenesis_enriched
      WBPaper00032031:DConiospora_upregulated_cDNA_12h
      WBPaper00032528:L3_enriched
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00033070:Elbe_upregulated
      WBPaper00035073:mitochondria_protein
      WBPaper00038118:aak-2(gt33)_upregulated
      WBPaper00038289:oocyte_protein
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00045774:clk-1_upregulated
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00048988:neuron_expressed
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053302:alovudine_72h_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053615:SMO-1_target
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00056275:P.aeruginosa_upregulated
      WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056501:P.aeruginosa_upregulated_mitochondria-protein
      WBPaper00056826:hmc_biased
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061527:F54D5.3_7003-F54D5.3_7004
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064163:ZNFX-1_interacting_embryo
      WBPaper00064163:ZNFX-1_interacting_young-adult
      WBPaper00064716:paraquat_downregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:AFD_depleted
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00025032:cluster_34
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031003:hlh_1_enriched
      WBPaper00032948:StarveUp3
      WBPaper00034757:down_by_oxidative_stress
      WBPaper00035560:ahr-1_upregulated
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_regulated_old
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00048624:hlh-25(ok1710)_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:cluster_32
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(101_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(PC32)
      [cgc5767]:expression_class_ME
    Interaction: WBInteraction000220614
      WBInteraction000551882
      WBInteraction000563221
      WBInteraction000574183
      WBInteraction000574569
      WBInteraction000576307
  Map_info: Positive: Positive_clone: K02D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -0.0560995
  Reference: WBPaper00022481
    WBPaper00024200
    WBPaper00038491
    WBPaper00055090
  Method: Gene