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WormBase Tree Display for Gene: WBGene00019145

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Name Class

WBGene00019145SMapS_parentSequenceH02F09
IdentityVersion1
NameSequence_nameH02F09.2
Molecular_nameH02F09.2
H02F09.2.1
CE35730
Other_nameCELE_H02F09.2Accession_evidenceNDBBX284606
Public_nameH02F09.2
DB_infoDatabaseAceViewgeneXC189
WormQTLgeneWBGene00019145
WormFluxgeneWBGene00019145
NDBlocus_tagCELE_H02F09.2
PanthergeneCAEEL|WormBase=WBGene00019145|UniProtKB=O76603
familyPTHR23062
NCBIgene186666
RefSeqproteinNM_001392729.1
TREEFAMTREEFAM_IDTF351352
TrEMBLUniProtAccO76603
UniProt_GCRPUniProtAccO76603
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (29)
RNASeq_FPKM (74)
Ortholog (20)
ParalogWBGene00023484Caenorhabditis elegansFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionIs affected by several genes including daf-16; daf-2; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Cadmium Chloride; Ag nanoparticles; and Cry5B based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSH02F09.2
Corresponding_CDS_historyH02F09.2:wp108
Corresponding_transcriptH02F09.2.1
Experimental_infoRNAi_resultWBRNAi00033643Inferred_automaticallyRNAi_primary
WBRNAi00049258Inferred_automaticallyRNAi_primary
WBRNAi00016161Inferred_automaticallyRNAi_primary
WBRNAi00033642Inferred_automaticallyRNAi_primary
Expr_patternExpr1023857
Expr1153002
Expr2004504
Drives_constructWBCnstr00026029
Construct_productWBCnstr00026029
Microarray_results (31)
Expression_clusterWBPaper00032528:L3_depleted
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00049498:npr-1(ur89)_regulated_7
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
WBPaper00056586:kri-1(ok1251);mpk-2(ok219)_downregulated
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00057068:Cadmium_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_upregulated
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00059426:Ag-nanoparticles_upregulated
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059754:C.neoformans_H99_upregulated
WBPaper00059754:P.aeruginosa_PA14_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:Y41D4B.17-K10D11.6
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_21
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027722:Microbacterium_nematophilum_upregulated
WBPaper00028789:PA14_vs_gacA_upregulated_4hr
WBPaper00028789:PA14_vs_gacA_upregulated_8hr
WBPaper00028789:PA14_vs_OP50_upregulated_4hr
WBPaper00028789:PA14_vs_OP50_upregulated_8hr
WBPaper00031003:hlh_1_enriched
WBPaper00031850:mdt-15(RNAi)_upregulated
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00032948:FedUp
WBPaper00035479:daf-16(RNAi)_upregulated
WBPaper00036286:Pattern_D
WBPaper00036286:Pattern_G
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038304:octr-1_regulated
WBPaper00039851:HK_C_albicans_vs_HK_OP50
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_EtBr-exposed_24h
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00051448:P.aeruginosa_Slow-Killing_upregulated
WBPaper00053236:Starvation_regulated_N2
WBPaper00053688:E.faecalis_upregulated
WBPaper00053688:E.faecium_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
InteractionWBInteraction000188937
Map_infoPositivePositive_cloneH02F09Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-17.9289
MethodGene