WormBase Tree Display for Gene: WBGene00019072

WBGene00019072 SMap: S_parent: Sequence: F58H7
  Identity: Version: 3
    Name: CGC_name: fbxc-8 Person_evidence: WBPerson655
      Sequence_name: F58H7.7
      Molecular_name: F58H7.7
        F58H7.7.1
        CE40753
      Other_name: CELE_F58H7.7 Accession_evidence: NDB BX284604
      Public_name: fbxc-8
    DB_info: Database: AceView gene 4B667
        WormQTL gene WBGene00019072
        WormFlux gene WBGene00019072
        NDB locus_tag CELE_F58H7.7
        NCBI gene 186554
        RefSeq protein NM_001268299.2
        TrEMBL UniProtAcc G5EG46
        UniProt_GCRP UniProtAcc G5EG46
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 17 Jun 2008 14:44:53 WBPerson2970 Name_change: CGC_name: fbxc-8
        3 21 Sep 2017 14:34:34 WBPerson4025 Event: Split_into: WBGene00271786
      Split_into: WBGene00271786
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxc
    Allele (16)
    RNASeq_FPKM (74)
    Ortholog: WBGene00032747 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00037895 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00038738 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00038739 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00143883 Caenorhabditis brenneri From_analysis: TreeFam
      chrIV_pilon.g9593 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (37)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in body wall muscle cell and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by eleven chemicals including mianserin; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F58H7.7
    Corresponding_CDS_history: F58H7.7:wp102
      F58H7.7a:wp261
      F58H7.7b:wp261
    Corresponding_transcript: F58H7.7.1
  Experimental_info: RNAi_result: WBRNAi00042477 Inferred_automatically: RNAi_primary
      WBRNAi00016034 Inferred_automatically: RNAi_primary
      WBRNAi00042471 Inferred_automatically: RNAi_primary
      WBRNAi00042476 Inferred_automatically: RNAi_primary
      WBRNAi00042475 Inferred_automatically: RNAi_primary
      WBRNAi00033146 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1152820
      Expr2011739
      Expr2029977
    Drives_construct: WBCnstr00026085
    Construct_product: WBCnstr00026085
    Microarray_results: SMD_F58H7.7
      180301_s_at
      182449_s_at
    Expression_cluster (81)
    SAGE_tag: SAGE:aagctttgaagtaccta Strand: Sense
      SAGE:tatctcttcc Strand: Antisense
      SAGE:aagctttgaa Strand: Sense
      SAGE:cattttccgatcgtaat Strand: Antisense
    Interaction (47)
  Map_info: Map: IV Position: -23.1044 Error: 0.036334
    Positive: Positive_clone: F58H7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene