WormBase Tree Display for Gene: WBGene00018986
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| WBGene00018986 | SMap | S_parent | Sequence | F56F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cdo-1 | |||||||
| Sequence_name | F56F10.3 | ||||||||
| Molecular_name | F56F10.3 | ||||||||
| F56F10.3.1 | |||||||||
| CE28465 | |||||||||
| Other_name | CELE_F56F10.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | cdo-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jan 2009 11:43:54 | WBPerson2970 | Name_change | CGC_name | cdo-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cdo | ||||||||
| Allele (18) | |||||||||
| Strain | WBStrain00002465 | ||||||||
| WBStrain00007973 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (26) | |||||||||
| Structured_description | Concise_description | cdo-1 encodes the C. elegans cysteine dioxygenase ortholog; by homology to mammalian enzymes, CDO-1 is predicted to function in cysteine catabolism by catalyzing the oxidation of cysteine to cysteine sulfanate. | Paper_evidence | WBPaper00031081 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 14 Dec 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable cysteine dioxygenase activity and ferrous iron binding activity. Predicted to be involved in L-cysteine catabolic process. Expressed in tail. Is an ortholog of human CDO1 (cysteine dioxygenase type 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56F10.3 | |||||||
| Corresponding_transcript | F56F10.3.1 | ||||||||
| Other_sequence (59) | |||||||||
| Associated_feature | WBsf236970 | ||||||||
| WBsf236971 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00094948 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032968 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048734 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1107 | ||||||||
| Expr3834 | |||||||||
| Expr6228 | |||||||||
| Expr1016079 | |||||||||
| Expr1152487 | |||||||||
| Expr2009820 | |||||||||
| Expr2028061 | |||||||||
| Drives_construct | WBCnstr00004505 | ||||||||
| WBCnstr00011685 | |||||||||
| WBCnstr00026147 | |||||||||
| Construct_product | WBCnstr00011685 | ||||||||
| WBCnstr00026147 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (154) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | X | Position | -19.4732 | Error | 0.002427 | |||
| Positive | Positive_clone | F56F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026926 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040475 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056452 | |||||||||
| WBPaper00064747 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
