WormBase Tree Display for Gene: WBGene00018986
expand all nodes | collapse all nodes | view schema
WBGene00018986 | SMap | S_parent | Sequence | F56F10 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cdo | ||||||
Allele (18) | |||||||
Strain | WBStrain00002465 | ||||||
WBStrain00007973 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (26) | |||||||
Structured_description | Concise_description | cdo-1 encodes the C. elegans cysteine dioxygenase ortholog; by homology to mammalian enzymes, CDO-1 is predicted to function in cysteine catabolism by catalyzing the oxidation of cysteine to cysteine sulfanate. | Paper_evidence | WBPaper00031081 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 14 Dec 2009 00:00:00 | ||||||
Automated_description | Predicted to enable cysteine dioxygenase activity and ferrous iron binding activity. Predicted to be involved in L-cysteine catabolic process. Expressed in tail. Is an ortholog of human CDO1 (cysteine dioxygenase type 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F56F10.3 | |||||
Corresponding_transcript | F56F10.3.1 | ||||||
Other_sequence (59) | |||||||
Associated_feature | WBsf236970 | ||||||
WBsf236971 | |||||||
Experimental_info | RNAi_result | WBRNAi00094948 | Inferred_automatically | RNAi_primary | |||
WBRNAi00032968 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048734 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1107 | ||||||
Expr3834 | |||||||
Expr6228 | |||||||
Expr1016079 | |||||||
Expr1152487 | |||||||
Expr2009820 | |||||||
Expr2028061 | |||||||
Drives_construct | WBCnstr00004505 | ||||||
WBCnstr00011685 | |||||||
WBCnstr00026147 | |||||||
Construct_product | WBCnstr00011685 | ||||||
WBCnstr00026147 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (154) | |||||||
Interaction (11) | |||||||
Map_info | Map | X | Position | -19.4732 | Error | 0.002427 | |
Positive | Positive_clone | F56F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00026926 | ||||||
WBPaper00038491 | |||||||
WBPaper00040475 | |||||||
WBPaper00055090 | |||||||
WBPaper00056452 | |||||||
WBPaper00064747 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |